RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NPRL3Q12980 569 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 SHROOM1Q2M3G4 852 aaPredicted RBP3.14□□□□□ -1.91
UBR1-205ENST00000564540 FUT11Q495W5 492 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 GLYR1Q49A26 553 aaPredicted RBP3.14□□□□□ -1.91
UBR1-205ENST00000564540 AARDQ4LEZ3 155 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 ERICH1Q86X53 443 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 PYROXD2Q8N2H3 581 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 OR52J3Q8NH60 311 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 IMMP1LQ96LU5 166 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 C19orf24Q9BVV8 132 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 TRPC4Q9UBN4 977 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 NARFQ9UHQ1 456 aa3.14□□□□□ -1.91
UBR1-205ENST00000564540 B4DXG7 233 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 C11orf98E9PRG8 122 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 SERF1AO75920 110 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 AKAP3O75969 853 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 TGDSO95455 350 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 GHRP10912 638 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 UGT1A6P19224 532 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 PSMB1P20618 241 aaKnown RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 OR3A4PP47883 348 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 EFNA3P52797 238 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 DIO3P55073 304 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 SGCBQ16585 318 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 CLPPQ16740 277 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 DCAF4L1Q3SXM0 396 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 GLRA4Q5JXX5 417 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 CELF3Q5SZQ8 465 aaKnown RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 NKAIN2Q5VXU1 208 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 C11orf88Q6PI97 169 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 TMEM270Q6UE05 265 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 SCARA5Q6ZMJ2 495 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 SETD7Q8WTS6 366 aaKnown RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 RNF138Q8WVD3 245 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 P3H4Q92791 437 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 BCL2L2Q92843 193 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 SLC25A38Q96DW6 304 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 APOOQ9BUR5 198 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 FUT8Q9BYC5 575 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 OPN3Q9H1Y3 402 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 MMADHCQ9H3L0 296 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 MAD2L2Q9UI95 211 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 FBXW2Q9UKT8 454 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 MRPS2Q9Y399 296 aaKnown RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 FLVCR1Q9Y5Y0 555 aa3.13□□□□□ -1.91
UBR1-205ENST00000564540 RAI1Q7Z5J4 1906 aaPredicted RBP3.13□□□□□ -1.91
UBR1-205ENST00000564540 A0A0J9YVX5 310 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 EEF2KO00418 725 aaKnown RBP3.12□□□□□ -1.91
UBR1-205ENST00000564540 NOL4O94818 638 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 ECDO95905 644 aaPredicted RBP3.12□□□□□ -1.91
UBR1-205ENST00000564540 IGLV1-47P01700 117 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 SERPINF2P08697 491 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 HOXB7P09629 217 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 FERP16591 822 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 TNNT3P45378 269 aaPredicted RBP3.12□□□□□ -1.91
UBR1-205ENST00000564540 PSG7Q13046 419 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 SMC1AQ14683 1233 aaKnown RBP3.12□□□□□ -1.91
UBR1-205ENST00000564540 SLMAPQ14BN4 828 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 ZKSCAN8Q15776 578 aaPredicted RBP3.12□□□□□ -1.91
UBR1-205ENST00000564540 SBK1Q52WX2 424 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 PRR5LQ6MZQ0 368 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 DNAJA3Q96EY1 480 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 DPH7Q9BTV6 452 aa3.12□□□□□ -1.91
UBR1-205ENST00000564540 ARID1AO14497 2285 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 MEGF6O75095 1541 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 CHEK1O14757 476 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ZNF17P17021 662 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 MDKP21741 143 aaPredicted RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 ZP3P21754 424 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ACVR1BP36896 505 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 UCP2P55851 309 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 SLC39A12Q504Y0 691 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 OTPQ5XKR4 325 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 IGFL3Q6UXB1 125 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 B3GLCTQ6Y288 498 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 TSEN54Q7Z6J9 526 aaKnown RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 SERPINA12Q8IW75 414 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 MCOLN2Q8IZK6 566 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ELSPBP1Q96BH3 223 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 C11orf24Q96F05 449 aaPredicted RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 ZNF184Q99676 751 aaPredicted RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 TM2D1Q9BX74 207 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 TSSK1BQ9BXA7 367 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 MRPL9Q9BYD2 267 aaKnown RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 NLNQ9BYT8 704 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ALG9Q9H6U8 611 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ZNF175Q9Y473 711 aa3.11□□□□□ -1.91
UBR1-205ENST00000564540 ZFP37Q9Y6Q3 630 aaPredicted RBP3.11□□□□□ -1.91
UBR1-205ENST00000564540 FAM170AA1A519 330 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 PDLIM1O00151 329 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 CFLARO15519 480 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 EMC8O43402 210 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 LATO43561 262 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 SDC3O75056 442 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 IGHV3-23P01764 117 aa3.1□□□□□ -1.91
UBR1-205ENST00000564540 HIST1H2AGP0C0S8 130 aaPredicted RBP3.1□□□□□ -1.91
UBR1-205ENST00000564540 PITPNBP48739 271 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms