RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CFHR1Q03591 330 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 GAB1Q13480 694 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 CALHM3Q86XJ0 350 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 LYSMD2Q8IV50 215 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 OR2I1PQ8NGU4 316 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 RHOXF1Q8NHV9 184 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 TCRBV3S1A0A5B6 114 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 GLOD5A6NK44 160 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 DUX1O43812 170 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 ABCB7O75027 752 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 NOS1APO75052 506 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 BCAS1O75363 584 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 AIFM1O95831 613 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 IFNA16P05015 189 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 NCK1P16333 377 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 GPX2P18283 190 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 FRKP42685 505 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 ST13P50502 369 aaKnown RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 COL9A2Q14055 689 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 C18orf63Q68DL7 685 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 USP53Q70EK8 1073 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 ZNF551Q7Z340 670 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 CLEC4FQ8N1N0 589 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 PSD4Q8NDX1 1056 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 IL17RDQ8NFM7 739 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 LRRC20Q8TCA0 184 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 DACT3Q96B18 629 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 FAM120BQ96EK7 910 aaKnown RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 ZNF578Q96N58 590 aaPredicted RBP16.64■□□□□ 0.25
GDE1-203ENST00000564172 NLNQ9BYT8 704 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 WDFY4Q6ZS81 3184 aa16.64■□□□□ 0.25
GDE1-203ENST00000564172 PGRMC2O15173 223 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 SIGLEC6O43699 453 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 YES1P07947 543 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 ZNF10P21506 573 aaPredicted RBP16.63■□□□□ 0.25
GDE1-203ENST00000564172 CD1CP29017 333 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 GABRA4P48169 554 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 CENPAP49450 140 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 ABHD18Q0P651 414 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 MERTKQ12866 999 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 NEDD8Q15843 81 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 GPR155Q7Z3F1 870 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 HDDC2Q7Z4H3 204 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 PLXDC1Q8IUK5 500 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 DTWD1Q8N5C7 304 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 PHF10Q8WUB8 498 aaKnown RBP16.63■□□□□ 0.25
GDE1-203ENST00000564172 FKBP10Q96AY3 582 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 USB1Q9BQ65 265 aaKnown RBP16.63■□□□□ 0.25
GDE1-203ENST00000564172 ADI1Q9BV57 179 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 CHRNA10Q9GZZ6 450 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 KCMF1Q9P0J7 381 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 UTS2RQ9UKP6 389 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 SLC22A7Q9Y694 548 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 SCN3AQ9NY46 2000 aa16.63■□□□□ 0.25
GDE1-203ENST00000564172 LY6G6EA0A0G2JKS1 128 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 A0A0X1KG70 313 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SAC3D1A6NKF1 404 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 AQP12BA6NM10 295 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 B3GALT2O43825 422 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 DNAJB6O75190 326 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 TRAPPC2P0DI81 140 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 TRAPPC2BP0DI82 140 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 IL1RNP18510 177 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 MANFP55145 182 aaKnown RBP16.62■□□□□ 0.25
GDE1-203ENST00000564172 RUNX2Q13950 521 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 CARTPTQ16568 116 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 DGUOKQ16854 277 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 GLYATQ6IB77 296 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 ZNF767PQ75MW2 155 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 PRSS41Q7RTY9 318 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 PROSER1Q86XN7 944 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 AQP12AQ8IXF9 295 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 ARHGEF39Q8N4T4 335 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 KLHL6Q8WZ60 621 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 OR5P2Q8WZ92 322 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 HTRA1Q92743 480 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 CCDC74AQ96AQ1 378 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 PDE7BQ9NP56 450 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SLC35C2Q9NQQ7 365 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SOHLH2Q9NX45 425 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 EIF3KQ9UBQ5 218 aaKnown RBP16.62■□□□□ 0.25
GDE1-203ENST00000564172 CES1P1Q9UKY3 287 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 DAPP1Q9UN19 280 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 DIMT1Q9UNQ2 313 aaKnown RBP16.62■□□□□ 0.25
GDE1-203ENST00000564172 U3KQA8 63 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 ELOVL7A1L3X0 281 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 CASC3O15234 703 aaKnown RBP16.62■□□□□ 0.25
GDE1-203ENST00000564172 CER1O95813 267 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SLC7A1P30825 629 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 GPR85P60893 370 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 NR0B2Q15466 257 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 PRTGQ2VWP7 1150 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SLC48A1Q6P1K1 146 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SPRED1Q7Z699 444 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SERPINA11Q86U17 422 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SLCO6A1Q86UG4 719 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 FAM181AQ8N9Y4 354 aa16.62■□□□□ 0.25
GDE1-203ENST00000564172 C7orf57Q8NEG2 295 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms