RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CALHM2Q9HA72 323 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 PRM3Q9NNZ6 103 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 PRTFDC1Q9NRG1 225 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 TSC22D4Q9Y3Q8 395 aa14.51□□□□□ -0.09
RNF40-205ENST00000563909 USF3Q68DE3 2245 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 C4orf51C9J302 202 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 PPP6CO00743 305 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 NPHS1O60500 1241 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 CLEC3AO75596 197 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 TRAPPC6AO75865 159 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 IFNA16P05015 189 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 SERPINA6P08185 405 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 PCNAP12004 261 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 NEFHP12036 1026 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 GDF1P27539 372 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 CPOXP36551 454 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 SERPINB5P36952 375 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 HSD17B7P56937 341 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 BTN3A2P78410 334 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 PHEXP78562 749 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 ELAVL1Q15717 326 aaKnown RBP14.5□□□□□ -0.09
RNF40-205ENST00000563909 CPSF6Q16630 551 aaKnown RBP eCLIP14.5□□□□□ -0.09
RNF40-205ENST00000563909 TOR1AIP1Q5JTV8 583 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 TTC19Q6DKK2 380 aaPredicted RBP14.5□□□□□ -0.09
RNF40-205ENST00000563909 GPRIN3Q6ZVF9 776 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 HOMEZQ8IX15 550 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 ZNF321PQ8N8H1 164 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 OR7G3Q8NG95 312 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 OR5L2Q8NGL0 311 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 IGFBPL1Q8WX77 278 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 ZBED6CLQ96FA7 236 aaPredicted RBP14.5□□□□□ -0.09
RNF40-205ENST00000563909 SFXN3Q9BWM7 321 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 OR8D2Q9GZM6 311 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 CXorf56Q9H5V9 222 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 SH2D2AQ9NP31 389 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 MID1IP1Q9NPA3 183 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 CLDN16Q9Y5I7 305 aa14.5□□□□□ -0.09
RNF40-205ENST00000563909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.092e-7■■□□□ 14.2
RNF40-205ENST00000563909 WDR91A4D1P6 747 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 SNPHO15079 494 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 KCNAB3O43448 404 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 OR4F21O95013 312 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 ESRRBO95718 433 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 ENO1P06733 434 aaKnown RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 CRYGSP22914 178 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 PIK3CBP42338 1070 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 STXBP1P61764 594 aaKnown RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 SRSF2Q01130 221 aaKnown RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 GALNT1Q10472 559 aaPredicted RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 ZNF791Q3KP31 576 aaPredicted RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 HSP90B2PQ58FF3 399 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 VASNQ6EMK4 673 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 CLNKQ7Z7G1 428 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 MORN4Q8NDC4 146 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 ZNF473Q8WTR7 871 aaKnown RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 CCT6BQ92526 530 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 FAR2Q96K12 515 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 MED18Q9BUE0 208 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 PROK2Q9HC23 129 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 EML4Q9HC35 981 aaKnown RBP14.49□□□□□ -0.09
RNF40-205ENST00000563909 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 SNX6Q9UNH7 406 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 SLC6A5Q9Y345 797 aa14.49□□□□□ -0.09
RNF40-205ENST00000563909 MYOCOSA0A1B0GUC4 107 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 A8MXE2 369 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 SPRY1O43609 319 aaPredicted RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 HNRNPFP52597 415 aaKnown RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 WDR4P57081 412 aaKnown RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 FAM27E3Q08E93 113 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 IFT88Q13099 833 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 RUNX2Q13950 521 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 LETMD1Q6P1Q0 360 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 VN1R5Q7Z5H4 357 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 TMEM52Q8NDY8 209 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 OR8K3Q8NH51 312 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 WDR20Q8TBZ3 569 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 METTL6Q8TCB7 284 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 MGARPQ8TDB4 240 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 PAQR8Q8TEZ7 354 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 PTPMT1Q8WUK0 201 aaPredicted RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 DAZLQ92904 295 aaKnown RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 INTS12Q96CB8 462 aaKnown RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 CMTM7Q96FZ5 175 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 WDYHV1Q96HA8 205 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 AICDAQ9GZX7 198 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 ELOVL6Q9H5J4 265 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 ZNF225Q9UK10 706 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 CDC42EP3Q9UKI2 254 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 MRPS33Q9Y291 106 aaKnown RBP14.48□□□□□ -0.09
RNF40-205ENST00000563909 WIF1Q9Y5W5 379 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 DOCK7Q96N67 2140 aa14.48□□□□□ -0.09
RNF40-205ENST00000563909 RAI1Q7Z5J4 1906 aaPredicted RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 A0A0G2JN53 185 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 LRIT2A6NDA9 550 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 FOXE1O00358 373 aaPredicted RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 UBFD1O14562 309 aaKnown RBP14.47□□□□□ -0.09
RNF40-205ENST00000563909 CRCPO75575 148 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 LRATO95237 230 aa14.47□□□□□ -0.09
RNF40-205ENST00000563909 KRT6AP02538 564 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms