RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MCATQ8IVS2 390 aaKnown RBP5.96□□□□□ -1.45
CLK3-212ENST00000563418 NPAS3Q8IXF0 933 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 MTURNQ8N3F0 131 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 OR51D1Q8NGF3 324 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 SCMH1Q96GD3 660 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TMEM27Q9HBJ8 222 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 FAM96BQ9Y3D0 163 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TMEM200CA6NKL6 621 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 GAPDHSO14556 408 aaPredicted RBP5.96□□□□□ -1.45
CLK3-212ENST00000563418 RPP14O95059 124 aaKnown RBP5.96□□□□□ -1.45
CLK3-212ENST00000563418 HRGP04196 525 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 B3GNT9Q6UX72 402 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 SEZ6L2Q6UXD5 910 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 COX15Q7KZN9 410 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 TXNRD3Q86VQ6 643 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 NTAN1Q96AB6 310 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 NXF2Q9GZY0 626 aaKnown RBP5.96□□□□□ -1.45
CLK3-212ENST00000563418 ARNT2Q9HBZ2 717 aa5.96□□□□□ -1.45
CLK3-212ENST00000563418 MT-ND4P03905 459 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 URODP06132 367 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 GNALP38405 381 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 RHOAP61586 193 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 UPP1Q16831 310 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 CILP2Q8IUL8 1156 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 NAGSQ8N159 534 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 C9orf62Q8N4C0 152 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ZNF610Q8N9Z0 462 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 TRAPPC12Q8WVT3 735 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 RGMAQ96B86 450 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ZDHHC15Q96MV8 337 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 HRH4Q9H3N8 390 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 LSM7Q9UK45 103 aaKnown RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 CD8B2A6NJW9 211 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 A8MVJ9 347 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 TISP43B9A030 160 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 CD8BP10966 210 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SPNP16150 400 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 PTH2RP49190 550 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 EPHA5P54756 1037 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 DIO3P55073 304 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SF1Q15637 639 aaKnown RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 RAB30Q15771 203 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SPANXN4Q5MJ08 99 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 EFCAB12Q6NXP0 572 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 MRPL10Q7Z7H8 261 aaKnown RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 SPICQ8N5J4 248 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 RAB7BQ96AH8 199 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ZBED6CLQ96FA7 236 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 GPR137Q96N19 417 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 DDOQ99489 341 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SGK2Q9HBY8 427 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 POM121BA6NF01 834 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ENTPD3O75355 529 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 CXCL8P10145 99 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 IFNGR1P15260 489 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 MAP3K8P41279 467 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SRP9P49458 86 aaKnown RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 PCGF3Q3KNV8 242 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 KLHDC1Q8N7A1 406 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 WDR77Q9BQA1 342 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 MARVELD1Q9BSK0 173 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SAMD10Q9BYL1 202 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 BRINP2Q9C0B6 783 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ACKR4Q9NPB9 350 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 EQTNQ9NQ60 294 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 FZD10Q9ULW2 581 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 DNAJC15Q9Y5T4 150 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 GJA3Q9Y6H8 435 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 TCP10L2B9ZVM9 353 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ERCC1P07992 297 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 OR8U9P0C7N5 309 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 OR1E1P30953 314 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 KCNJ10P78508 379 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 LAMTOR4Q0VGL1 99 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SLC17A1Q14916 467 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 PCK2Q16822 640 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 FAM196AQ6ZSG2 479 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ACOT7LQ6ZUV0 252 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 PDZD3Q86UT5 571 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 STT3BQ8TCJ2 826 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 RAET1EQ8TD07 263 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 EXTL1Q92935 676 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 CLEC2LP0C7M8 214 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 NME1P15531 152 aaKnown RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 TUSC1Q2TAM9 212 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SLC16A13Q7RTY0 426 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 POMGNT2Q8NAT1 580 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 STEAP2Q8NFT2 490 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 SLC25A21Q9BQT8 299 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 ELOVL4Q9GZR5 314 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 RDH14Q9HBH5 336 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ACSS1Q9NUB1 689 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 SLC17A6Q9P2U8 582 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 PLEKHM1Q9Y4G2 1056 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 LOC390937A0A1W2PQ73 354 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 NEMP2A6NFY4 417 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 HMSDA8MTL9 139 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 GPR171O14626 319 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 HRO43593 1189 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms