RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 KAT2AQ92830 837 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PPCDCQ96CD2 204 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ELP4Q96EB1 424 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 MAGEB18Q96M61 343 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 BBS4Q96RK4 519 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 HES7Q9BYE0 225 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 WDR55Q9H6Y2 383 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ANKRA2Q9H9E1 313 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ASF1BQ9NVP2 202 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 NTMQ9P121 344 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 C19orf53Q9UNZ5 99 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 EIF3LQ9Y262 564 aaKnown RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CFL2Q9Y281 166 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SHANK1Q9Y566 2161 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CROCCQ5TZA2 2017 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 A8MVJ9 347 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 UPK1AO00322 258 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 TO15178 435 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PDPK1O15530 556 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CT45A8P0DMV1 189 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CT45A9P0DMV2 189 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 KITP10721 976 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 LAMP1P11279 417 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 DRD5P21918 477 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 EPHA3P29320 983 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 NTSP30990 170 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 RPL3P39023 403 aaKnown RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 MC3RP41968 323 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PPICP45877 212 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CT45A2Q5DJT8 189 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 IL20RBQ6UXL0 311 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ZNF551Q7Z340 670 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 GALNTL5Q7Z4T8 443 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 KRTCAP2Q8N6L1 136 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 NATD1Q8N6N6 113 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM178AQ8NBL3 297 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PSD4Q8NDX1 1056 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PSMA8Q8TAA3 256 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SLC22A8Q8TCC7 542 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ACTRT2Q8TDY3 377 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 NUDT8Q8WV74 236 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 FAR1Q8WVX9 515 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ASB15Q8WXK1 588 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 CIDECQ96AQ7 238 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SPACA9Q96E40 222 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ZBED6CLQ96FA7 236 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SGCZQ96LD1 299 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 VSTM2LQ96N03 204 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 BTBD9Q96Q07 612 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 GAL3ST4Q96RP7 486 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SLX1AQ9BQ83 275 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 ITPAQ9BY32 194 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 NXF5Q9H1B4 397 aaKnown RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 MED4Q9NPJ6 270 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 HPF1Q9NWY4 346 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 SH3BP4Q9P0V3 963 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 PRODH2Q9UF12 536 aa5.71□□□□□ -1.5
CNOT1-204ENST00000563130 GPR55Q9Y2T6 319 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 COPG1Q9Y678 874 aaKnown RBP5.71□□□□□ -1.5
CNOT1-204ENST00000563130 J3QKU1 62 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 SCN2BO60939 215 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 RASAL1O95294 804 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 TGDSO95455 350 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NAGAP17050 411 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 HPCAL1P37235 193 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 MAP3K8P41279 467 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NR0B1P51843 470 aaKnown RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 DCAF7P61962 342 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 PSG6Q00889 435 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 IGFBP7Q16270 282 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NTRK2Q16620 822 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 SLC9B1Q4ZJI4 515 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 CPTPQ5TA50 214 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 EPGNQ6UW88 154 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM107Q6UX40 140 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 RTL4Q6ZR62 310 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 DND1Q8IYX4 353 aaKnown RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 OR8J2Q8NGG1 315 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 DNAJB8Q8NHS0 232 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 GRHL3Q8TE85 626 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 PAQR8Q8TEZ7 354 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 DYDC1Q8WWB3 177 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 TESCQ96BS2 214 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NTNG2Q96CW9 530 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 HSPBAP1Q96EW2 488 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 LCORQ96JN0 433 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 C5orf34Q96MH7 638 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 FRMD6Q96NE9 622 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 GSX2Q9BZM3 304 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 TRIM4Q9C037 500 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 KLHL1Q9NR64 748 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 SIRT3Q9NTG7 399 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 DEPPQ9NTK1 212 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 ATAD3AQ9NVI7 634 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 AIG1Q9NVV5 245 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 TAS2R9Q9NYW1 312 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 BCAP29Q9UHQ4 241 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms