RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 HEMK1Q9Y5R4 338 aaPredicted RBP9.19□□□□□ -0.94
KNSTRN-215ENST00000561367 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
KNSTRN-215ENST00000561367 URB1O60287 2271 aaKnown RBP9.19□□□□□ -0.94
KNSTRN-215ENST00000561367 IGF2RP11717 2491 aa9.19□□□□□ -0.94
KNSTRN-215ENST00000561367 ANKRD11Q6UB99 2663 aaPredicted RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 TRBV11-1A0A0K0K1C0 115 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 C2orf92A0A1B0GVN3 265 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 A0A1W2PS29 197 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 CAPN14A8MX76 684 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 ASNA1O43681 348 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 CT62P0C5K7 136 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 NAGAP17050 411 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 CAPN3P20807 821 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 DRD5P21918 477 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 SSTR4P31391 388 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 TMED10P49755 219 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 EMDP50402 254 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 CDK9P50750 372 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 NRG3P56975 720 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 MRPS35P82673 323 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 Q0VFX4 171 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 EBPQ15125 230 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 LTB4RQ15722 352 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 MMEL1Q495T6 779 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 TRMT12Q53H54 448 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 C6orf10Q5SRN2 563 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 ATP1A1-AS1Q5TC04 95 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 ABHD17BQ5VST6 288 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 FAM111BQ6SJ93 734 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 ISLR2Q6UXK2 745 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 DGAT2L6Q6ZPD8 337 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 RPS19BP1Q86WX3 136 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 CLECL1Q8IZS7 167 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 TAGAPQ8N103 731 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 NUP43Q8NFH3 380 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 OR52R1Q8NGF1 315 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 C16orf52Q8NHV5 167 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 SLC22A8Q8TCC7 542 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 MIPOL1Q8TD10 442 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 HOXB13Q92826 284 aaPredicted RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 KAT2AQ92830 837 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 VPS33AQ96AX1 596 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 FAM120BQ96EK7 910 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 HSPBAP1Q96EW2 488 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 WBP1Q96G27 269 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 VSTM2LQ96N03 204 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 BTBD9Q96Q07 612 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 STACQ99469 402 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 SH3GL1Q99961 368 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 WWTR1Q9GZV5 400 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 EFCAB1Q9HAE3 211 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 DUSP22Q9NRW4 184 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 GID8Q9NWU2 228 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 MYOTQ9UBF9 498 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 MRTO4Q9UKD2 239 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 FAF1Q9UNN5 650 aaPredicted RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 AP3M1Q9Y2T2 418 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 YARS2Q9Y2Z4 477 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 SNX8Q9Y5X2 465 aa9.18□□□□□ -0.94
KNSTRN-215ENST00000561367 C15orf38-AP3S2A0A0A6YYH1 394 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 RNF103-CHMP3A0A140T963 221 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 MYOCOSA0A1B0GUC4 107 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 FRG2CA6NGY1 282 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 TO15178 435 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CPSF4O95639 269 aaKnown RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 AK1P00568 194 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CLPSP04118 112 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ABCB1P08183 1280 aaPredicted RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ITGAMP11215 1152 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 LCN1P31025 176 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 TRHRP34981 398 aaPredicted RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 SOAT1P35610 550 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 SOX18P35713 384 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CHI3L1P36222 383 aaPredicted RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CASRP41180 1078 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CCL11P51671 97 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 PSMD4P55036 377 aaKnown RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 MLF1P58340 268 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 MRPS22P82650 360 aaKnown RBP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 SF3A3Q12874 501 aaKnown RBP eCLIP9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 FADDQ13158 208 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 KRT72Q14CN4 511 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 TBR1Q16650 682 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ST3GAL2Q16842 350 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 CYP27C1Q4G0S4 372 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ACER2Q5QJU3 275 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 SAXO2Q658L1 398 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 MFSD12Q6NUT3 480 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 OPN5Q6U736 354 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 IGFL2Q6UWQ7 119 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 IGFL3Q6UXB1 125 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 GK5Q6ZS86 529 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ZNF621Q6ZSS3 439 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ARPINQ7Z6K5 226 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 ANKRD46Q86W74 232 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 C9orf40Q8IXQ3 194 aa9.17□□□□□ -0.94
KNSTRN-215ENST00000561367 HORMAD2Q8N7B1 307 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms