RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SNX4O95219 450 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 DDCP20711 480 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 ADH7P40394 386 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 CDK9P50750 372 aaKnown RBP15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 CORO7P57737 925 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 SLC18A2Q05940 514 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 TFF3Q07654 80 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 C2orf80Q0P641 193 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 TOMM20Q15388 145 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 ERCC6LQ2NKX8 1250 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 ANGPTL8Q6UXH0 198 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 C10orf107Q8IVU9 208 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 FAM9CQ8IZT9 166 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 ACBD4Q8NC06 268 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 OR7G2Q8NG99 324 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 LILRB4Q8NHJ6 448 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 TMBIM1Q969X1 311 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 TMEM41AQ96HV5 264 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 APOPT1Q96IL0 206 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 GNRHR2Q96P88 292 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 BBS4Q96RK4 519 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 OSBPL11Q9BXB4 747 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 ENKD1Q9H0I2 346 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 SIRT5Q9NXA8 310 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 KLRF1Q9NZS2 232 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 FIS1Q9Y3D6 152 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 OTOGQ6ZRI0 2925 aa15.73■□□□□ 0.11
CDC42BPB-208ENST00000561271 A0A0G2JNJ9 132 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 C2orf72A6NCS6 295 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 PRAMEF25A6NGN4 478 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 H3BQF6 201 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 RSL1D1O76021 490 aaKnown RBP15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 TOXO94900 526 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 NAGAP17050 411 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 DRD5P21918 477 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 PTGDSP41222 190 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 PPICP45877 212 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 GSTM5P46439 218 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 DCAF7P61962 342 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 CRYZQ08257 329 aaKnown RBP15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 CEBPEQ15744 281 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 NPSR1Q6W5P4 371 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 TRIM46Q7Z4K8 759 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 ULK2Q8IYT8 1036 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 SAMD14Q8IZD0 417 aaPredicted RBP15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 VSTM2LQ96N03 204 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 BTBD9Q96Q07 612 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 SPOCK3Q9BQ16 436 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 IQCGQ9H095 443 aaKnown RBP15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 FOLH1BQ9HBA9 442 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 MYNNQ9NPC7 610 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 MIEF1Q9NQG6 463 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 Q9UFV3 132 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 MID2Q9UJV3 735 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 MAPRE3Q9UPY8 281 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 SLC6A5Q9Y345 797 aa15.72■□□□□ 0.11
CDC42BPB-208ENST00000561271 KDM4EB2RXH2 506 aaPredicted RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 SNPHO15079 494 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 TO15178 435 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 ERN1O75460 977 aaKnown RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 JUNP05412 331 aaKnown RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 HPNP05981 417 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 CT45A8P0DMV1 189 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 CT45A9P0DMV2 189 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 UROSP10746 265 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 GABRA1P14867 456 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 MSX1P28360 303 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 PTPN6P29350 595 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 MC3RP41968 323 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 NCBP2P52298 156 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 WNT3P56703 355 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 ZNF155Q12901 538 aaPredicted RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 EIPR1Q53HC9 387 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 CT45A2Q5DJT8 189 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 WIPI1Q5MNZ9 446 aaPredicted RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 DCST1Q5T197 706 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 TIGD3Q6B0B8 471 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 FAM71E1Q6IPT2 247 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 NUP54Q7Z3B4 507 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 TRABD2AQ86V40 505 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 OR1J4Q8NGS1 313 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 NTNG2Q96CW9 530 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 ERP27Q96DN0 273 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 LURAP1Q96LR2 239 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 GATA5Q9BWX5 397 aaPredicted RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 KCNJ16Q9NPI9 418 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 RRAGDQ9NQL2 400 aaPredicted RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 MKS1Q9NXB0 559 aa15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 EXO1Q9UQ84 846 aaKnown RBP15.71■□□□□ 0.11
CDC42BPB-208ENST00000561271 F8P00451 2351 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 MED13LQ71F56 2210 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 MYO1GB0I1T2 1018 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 ICOSLGO75144 302 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 REM1O75628 298 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 BCAS2O75934 225 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 NUDT17P0C025 328 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 IGFBP2P18065 325 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms