RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ITM2AO43736 263 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 PLOD3O60568 738 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 GLSO94925 669 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SNX4O95219 450 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 CLDN1O95832 211 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ABCB1P08183 1280 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 CELA3AP09093 270 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 BCKDHAP12694 445 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 NAGAP17050 411 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 DDX5P17844 614 aaKnown RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 IL12BP29460 328 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ARRB2P32121 409 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SOX18P35713 384 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 HPCAL1P37235 193 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SLC1A6P48664 564 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 MAN2A2P49641 1150 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SMSP52788 366 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 MANFP55145 182 aaKnown RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 CORO7P57737 925 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 FOXO1Q12778 655 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 GTF3C1Q12789 2109 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNHIT3Q15649 155 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 CEBPEQ15744 281 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 Q6ZPB1 254 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF551Q7Z340 670 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 NUP54Q7Z3B4 507 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 MRGPRGQ86SM5 289 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 DOLPP1Q86YN1 238 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 LIX1Q8N485 282 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZFP28Q8NHY6 868 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 FAM57AQ8TBR7 257 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SPPL2AQ8TCT8 520 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMBIM1Q969X1 311 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 CIDECQ96AQ7 238 aaPredicted RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 AMDHD1Q96NU7 426 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 SECISBP2Q96T21 854 aaKnown RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 C1orf50Q9BV19 199 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZDHHC11Q9H8X9 412 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 FOLH1BQ9HBA9 442 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 ACAD8Q9UKU7 415 aa11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 EXO1Q9UQ84 846 aaKnown RBP11.91□□□□□ -0.5
CTDSPL2-209ENST00000560620 NINQ8N4C6 2090 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TRGV5A0A0B4J1U4 118 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 GNB5O14775 395 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TRAPPC6AO75865 159 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 SLITRK5O94991 958 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 RFPL3SP0C7P2 107 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 BGNP21810 368 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 GRK2P25098 689 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 COL8A1P27658 744 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 CASP3P42574 277 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TRPC1P48995 793 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 PRKAG1P54619 331 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 MAGOHP61326 146 aaKnown RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 STX3Q13277 289 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 MPP2Q14168 576 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 BEND6Q5SZJ8 279 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 DESI1Q6ICB0 168 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 RPTNQ6XPR3 784 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 LARP4Q71RC2 724 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF781Q8N8C0 355 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 OR5M9Q8NGP3 310 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMCO6Q96DC7 493 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZBED6CLQ96FA7 236 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 C3orf30Q96M34 536 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 COL21A1Q96P44 957 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ADOQ96SZ5 270 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ANGPTL4Q9BY76 406 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF703Q9H7S9 590 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF395Q9H8N7 513 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 EQTNQ9NQ60 294 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ALKBH4Q9NXW9 302 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 NKIRAS1Q9NYS0 192 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 TNFRSF10DQ9UBN6 386 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 EIF3LQ9Y262 564 aaKnown RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 GPR55Q9Y2T6 319 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 MEMO1Q9Y316 297 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 RAP2CQ9Y3L5 183 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 LIPGQ9Y5X9 500 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
CTDSPL2-209ENST00000560620 A0A087WV62 115 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 ANKRD33BA6NCL7 494 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 LRRC3CA6NJW4 275 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 E9PLN8 166 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 UPK1AO00322 258 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 SUSD5O60279 629 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 UGT2B11O75310 529 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 SNUPNO95149 360 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRPS2P11908 318 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 EFNA1P20827 205 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 RFX3P48380 749 aa11.89□□□□□ -0.51
CTDSPL2-209ENST00000560620 RPL14P50914 215 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms