RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 BCAS2O75934 225 aaPredicted RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 NKX2-2O95096 273 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 ZIC2O95409 532 aaPredicted RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 ANP32DO95626 131 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 HPP00738 406 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR12D1P0DN82 309 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 MATN1P21941 496 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OTX2P32243 289 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 EIF2S3P41091 472 aaKnown RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 MS4A2Q01362 244 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 ATP1A4Q13733 1029 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 LASP1Q14847 261 aaKnown RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 EBPQ15125 230 aaKnown RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 DUSP5Q16690 384 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 HEPHL1Q6MZM0 1159 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 CDC73Q6P1J9 531 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 ZCCHC12Q6PEW1 402 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 C16orf89Q6UX73 402 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 BNC2Q6ZN30 1099 aaPredicted RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 MRGPREQ86SM8 312 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 ARMC10Q8N2F6 343 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 TRIML2Q8N7C3 387 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR4N2Q8NGD1 307 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR56A1Q8NGH5 318 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR5D16Q8NGK9 328 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR8K3Q8NH51 312 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 M1APQ8TC57 530 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OTUB1Q96FW1 271 aaPredicted RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR7D2Q96RA2 312 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 CNPPD1Q9BV87 410 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 ACTRT3Q9BYD9 372 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 DPH1Q9BZG8 443 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 OR51I1Q9H343 314 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 C3orf14Q9HBI5 128 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 FBXO34Q9NWN3 711 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 C19orf25Q9UFG5 118 aaPredicted RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 FBXL4Q9UKA2 621 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.69□□□□□ -1.02
HERC1-206ENST00000559996 DOCK10Q96BY6 2186 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 CACNA1AO00555 2505 aa8.69□□□□□ -1.02
HERC1-206ENST00000559996 GXYLT2A0PJZ3 443 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 GYG2O15488 501 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 DNAJC8O75937 253 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 NADKO95544 446 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 KRT75O95678 551 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 IGKV1D-16P01601 117 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 TFPTP0C1Z6 253 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 ITGAMP11215 1152 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 HSD17B1P14061 328 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 DRD5P21918 477 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 MSX2P35548 267 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 SOAT1P35610 550 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 PPICP45877 212 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 GSK3BP49841 420 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 CRYBA2P53672 197 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 CORO7P57737 925 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 EEFSECP57772 596 aaKnown RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 KCNJ2P63252 427 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 RNF4P78317 190 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 PRR5P85299 388 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 LIPEQ05469 1076 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 CHAF1BQ13112 559 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 FADDQ13158 208 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 TP53BP2Q13625 1128 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 TNFAIP8L2Q6P589 184 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 C16orf47Q6ZP98 133 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 SERPINA11Q86U17 422 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 ZZZ3Q8IYH5 903 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 LGI4Q8N135 537 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 RNF148Q8N7C7 305 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 CDRT4Q8N9R6 151 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 FAM156AQ8NDB6 213 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 ZNF248Q8NDW4 579 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 CHDHQ8NE62 594 aaPredicted RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 KCNE4Q8WWG9 221 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 RAB8BQ92930 207 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 MAL2Q969L2 176 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 SLC35G5Q96KT7 338 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 MS4A4EQ96PG1 132 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 BTBD9Q96Q07 612 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 LMF1Q96S06 567 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 EFHD1Q9BUP0 239 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 THUMPD3Q9BV44 507 aaKnown RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 ITPAQ9BY32 194 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 NXF5Q9H1B4 397 aaKnown RBP8.68□□□□□ -1.02
HERC1-206ENST00000559996 PIGUQ9H490 435 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 PIF1Q9H611 641 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 TMEM38AQ9H6F2 299 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 SPAG4Q9NPE6 437 aa8.68□□□□□ -1.02
HERC1-206ENST00000559996 DDX18Q9NVP1 670 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms