RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 WDR53Q7Z5U6 358 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-205ENST00000559898 LIX1Q8N485 282 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 WDSUB1Q8N9V3 476 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 FAM83FQ8NEG4 500 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-205ENST00000559898 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.18■□□□□ 0.18
HDDC3-205ENST00000559898 RDH11Q8TC12 318 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 ZNF675Q8TD23 568 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 EGLN2Q96KS0 407 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 METTL7AQ9H8H3 244 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 ANKZF1Q9H8Y5 726 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 FOLH1BQ9HBA9 442 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 SERHLQ9NQF3 203 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 SLC35C2Q9NQQ7 365 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 NMRK1Q9NWW6 199 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 FLRT3Q9NZU0 649 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 CCL27Q9Y4X3 112 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 CELSR1Q9NYQ6 3014 aa16.18■□□□□ 0.18
HDDC3-205ENST00000559898 SERTM1A2A2V5 107 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 FRG2CA6NGY1 282 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 CAPN14A8MX76 684 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 SNX4O95219 450 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 KRT15P19012 456 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 DRD5P21918 477 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 TCEA1P23193 301 aaKnown RBP16.17■□□□□ 0.18
HDDC3-205ENST00000559898 SSTR2P30874 369 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 PPICP45877 212 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 AGFG1P52594 562 aaKnown RBP16.17■□□□□ 0.18
HDDC3-205ENST00000559898 C2orf80Q0P641 193 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 TOMM20Q15388 145 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 CEBPEQ15744 281 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 SPIN4Q56A73 249 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 SPDYAQ5MJ70 313 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 TBCELQ5QJ74 424 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 TIGD3Q6B0B8 471 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 OR5M10Q6IEU7 315 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 FAM71E1Q6IPT2 247 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 GALNT18Q6P9A2 607 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 PACS2Q86VP3 889 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 GBP7Q8N8V2 638 aaPredicted RBP16.17■□□□□ 0.18
HDDC3-205ENST00000559898 HSPBAP1Q96EW2 488 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 WDYHV1Q96HA8 205 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 VSTM2LQ96N03 204 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 DOCK7Q96N67 2140 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 SECISBP2Q96T21 854 aaKnown RBP16.17■□□□□ 0.18
HDDC3-205ENST00000559898 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 L2HGDHQ9H9P8 463 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 B4GALT7Q9UBV7 327 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 PSME2Q9UL46 239 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 CAMK2AQ9UQM7 478 aa16.17■□□□□ 0.18
HDDC3-205ENST00000559898 MYO1GB0I1T2 1018 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 SNPHO15079 494 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 TO15178 435 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 TSPAN2O60636 221 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 REM1O75628 298 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 JUNP05412 331 aaKnown RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 HOXD4P09016 255 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 DRD2P14416 443 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 ELAVL4P26378 380 aaKnown RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 TMED10P49755 219 aaKnown RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 PCLAFQ15004 111 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 RIPPLY2Q5TAB7 128 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 VASNQ6EMK4 673 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 ANKRD26P1Q6NSI1 321 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 NUP54Q7Z3B4 507 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 C10orf107Q8IVU9 208 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 OR1J4Q8NGS1 313 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 OR2T11Q8NH01 316 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 EFHD2Q96C19 240 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 BTBD9Q96Q07 612 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 ADOQ96SZ5 270 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 RTN4RQ9BZR6 473 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 TUBB1Q9H4B7 451 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 MCCC2Q9HCC0 563 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 OXSMQ9NWU1 459 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 SIRT5Q9NXA8 310 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 FBXL2Q9UKC9 423 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 FIS1Q9Y3D6 152 aa16.16■□□□□ 0.18
HDDC3-205ENST00000559898 TEP1Q99973 2627 aaKnown RBP16.16■□□□□ 0.18
HDDC3-205ENST00000559898 PRAMEF25A6NGN4 478 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 CPA3P15088 417 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 KRT4P19013 534 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 CRHR1P34998 444 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 MC3RP41968 323 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 STARP49675 285 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 ZNF136P52737 540 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 SLC18A2Q05940 514 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 KIAA0040Q15053 153 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 TMEM107Q6UX40 140 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 TDRPQ86YL5 185 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 GFM2Q969S9 779 aaKnown RBP16.15■□□□□ 0.18
HDDC3-205ENST00000559898 GATA5Q9BWX5 397 aaPredicted RBP16.15■□□□□ 0.18
HDDC3-205ENST00000559898 PRDM14Q9GZV8 571 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 GLIPR2Q9H4G4 154 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 KLRF1Q9NZS2 232 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 PRODH2Q9UF12 536 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 CFL2Q9Y281 166 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 L3MBTL1Q9Y468 752 aa16.15■□□□□ 0.18
HDDC3-205ENST00000559898 HRNRQ86YZ3 2850 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-205ENST00000559898 TMEM233B4DJY2 109 aa16.14■□□□□ 0.17
HDDC3-205ENST00000559898 ACOX3O15254 700 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms