RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 STEAP2Q8NFT2 490 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 OR1K1Q8NGR3 316 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 OR2T3Q8NH03 318 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF519Q8TB69 540 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RLN3Q8WXF3 142 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FBXO32Q969P5 355 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RAB3CQ96E17 227 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CNRIP1Q96F85 164 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SDSLQ96GA7 329 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 GMPPAQ96IJ6 420 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CNDP1Q96KN2 507 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 LRR1Q96L50 414 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ALKBH3Q96Q83 286 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 NODALQ96S42 347 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CPXM1Q96SM3 734 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZBTB18Q99592 522 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SYT15Q9BQS2 421 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 EDEM2Q9BV94 578 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 TBC1D10AQ9BXI6 508 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CRNKL1Q9BZJ0 848 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 STRADBQ9C0K7 418 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 WDR13Q9H1Z4 485 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 MED20Q9H944 212 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 VPS37BQ9H9H4 285 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CALHM2Q9HA72 323 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 Q9HAA7 133 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FANCFQ9NPI8 374 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 FAM114A2Q9NRY5 505 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 AGPAT5Q9NUQ2 364 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 DCAF13Q9NV06 445 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 GPR83Q9NYM4 423 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 RABL2AQ9UBK7 228 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CTNNA3Q9UI47 895 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 LCMT1Q9UIC8 334 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 PTBP2Q9UKA9 531 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 ZNF346Q9UL40 294 aaKnown RBP1.97□□□□□ -2.09
GABPB1-209ENST00000559100 TCF19Q9Y242 345 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 WDR45Q9Y484 360 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 AUP1Q9Y679 476 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 SPACA6W5XKT8 324 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CARMIL1Q5VZK9 1371 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 PARD3Q8TEW0 1356 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CCDC7Q96M83 1385 aa1.97□□□□□ -2.09
GABPB1-209ENST00000559100 CUX2O14529 1486 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 A0A1B0GUV1 79 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CTAGE15A4D2H0 777 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 METTL21EPA6NDL7 271 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN5CA6NGD5 496 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FAM74A7A6NL05 159 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF724A8MTY0 619 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 C11orf98E9PRG8 122 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PPIAL4DF5H284 164 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SLCO1B7G3V0H7 640 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 K7EQD1 137 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 AP3B1O00203 1094 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PDHXO00330 501 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PRRG1O14668 218 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 TFECO14948 347 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 OR1F1O43749 312 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 N4BP1O75113 896 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CEACAM4O75871 244 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PDE5AO76074 875 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 LRATO95237 230 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SERPINA3P01011 423 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 IGLV2-11P01706 119 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 TOP1P11387 765 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NCF2P19878 526 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 HNF1AP20823 631 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF10P21506 573 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PPP2R1BP30154 601 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 BRCC3P46736 316 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 DHPSP49366 369 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NDST2P52849 883 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CRYBA2P53672 197 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FOXG1P55316 489 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 UBE2HP62256 183 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CYCSP99999 105 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 TNFRSF17Q02223 184 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FGL1Q08830 312 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ILF3Q12906 894 aaKnown RBP eCLIP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 MRPL28Q13084 256 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 TFDP1Q14186 410 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SELPLGQ14242 412 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FASTKQ14296 549 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CHI3L2Q15782 390 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 UBE2V2Q15819 145 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC6Q16204 474 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 IMMTQ16891 758 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CNPY1Q3B7I2 92 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FAM74A3Q4VXF1 159 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 MUC21Q5SSG8 566 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 DOK6Q6PKX4 331 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF562Q6V9R5 426 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SYT10Q6XYQ8 523 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CTAGE6Q86UF2 777 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM17Q86X19 198 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CATSPERDQ86XM0 798 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 DCUN1D3Q8IWE4 304 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 METTL4Q8N3J2 472 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SAMD12Q8N8I0 201 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms