RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ADORA2A-AS1P86434 159 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 MAP4K2Q12851 820 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 HSPB3Q12988 150 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 ZNF628Q5EBL2 1059 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 CHERPQ8IWX8 916 aaKnown RBP11.03□□□□□ -0.64
TPM1-216ENST00000558910 FAM9CQ8IZT9 166 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 RPRMLQ8N4K4 120 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 GOLM1Q8NBJ4 401 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 OR7G2Q8NG99 324 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 OR7G1Q8NGA0 311 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 RELTQ969Z4 430 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 ADIPOR1Q96A54 375 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 CIDECQ96AQ7 238 aaPredicted RBP11.03□□□□□ -0.64
TPM1-216ENST00000558910 OMA1Q96E52 524 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 SLC6A15Q9H2J7 730 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 METTL7AQ9H8H3 244 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 IL1RL2Q9HB29 575 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 EQTNQ9NQ60 294 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 C1orf109Q9NX04 203 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 SH3BP4Q9P0V3 963 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 ACAD8Q9UKU7 415 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 TRAF6Q9Y4K3 522 aa11.03□□□□□ -0.64
TPM1-216ENST00000558910 PCNX1Q96RV3 2341 aa11.02□□□□□ -0.64
TPM1-216ENST00000558910 WIPF3A6NGB9 483 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ITM2AO43736 263 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 HSPA4LO95757 839 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ATP1B1P05026 303 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 GDF1P27539 372 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ABCD3P28288 659 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ARRB2P32121 409 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 MPIP34949 423 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 SOX18P35713 384 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 MAN2A2P49641 1150 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 GSK3AP49840 483 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PRKAG1P54619 331 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 SLC10A1Q14973 349 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 RPS6KA2Q15349 733 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 CDSNQ15517 529 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 KANK2Q63ZY3 851 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 TMEM198Q66K66 360 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 FAM71E1Q6IPT2 247 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PAOXQ6QHF9 649 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 Q6ZSR9 355 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ZNF551Q7Z340 670 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 EXOC3L1Q86VI1 746 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 SLC44A2Q8IWA5 706 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 CNPY4Q8N129 248 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 FBXW8Q8N3Y1 598 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 MREGQ8N565 214 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 SLC15A4Q8N697 577 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ZNF441Q8N8Z8 693 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 OR4N2Q8NGD1 307 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 FAM57AQ8TBR7 257 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PAQR8Q8TEZ7 354 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ITLN2Q8WWU7 325 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 TMBIM1Q969X1 311 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 LCORQ96JN0 433 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 RILPQ96NA2 401 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 NODALQ96S42 347 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PROK2Q9HC23 129 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 EML4Q9HC35 981 aaKnown RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 GALNT9Q9HCQ5 603 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 MKS1Q9NXB0 559 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 KLRF1Q9NZS2 232 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ZDHHC2Q9UIJ5 367 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 CNOT11Q9UKZ1 510 aaKnown RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 BOKQ9UMX3 212 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 MAPRE3Q9UPY8 281 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 MEMO1Q9Y316 297 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 OR10H1Q9Y4A9 318 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 DNAJC15Q9Y5T4 150 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 CHCHD2Q9Y6H1 151 aaPredicted RBP11.02□□□□□ -0.65
TPM1-216ENST00000558910 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 NINQ8N4C6 2090 aa11.02□□□□□ -0.65
TPM1-216ENST00000558910 ZNF407Q9C0G0 2248 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 CAPN14A8MX76 684 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 TYROBPO43914 113 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 GMFGO60234 142 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 NPHS1O60500 1241 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 BGNP21810 368 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 KRT20P35900 424 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 DCTP40126 519 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 SERPINB4P48594 390 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 EMDP50402 254 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 NAA20P61599 178 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 FOXO1Q12778 655 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 NTRK2Q16620 822 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 RFTN2Q52LD8 501 aaPredicted RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 ZNF385BQ569K4 471 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 SP5Q6BEB4 398 aaPredicted RBP11.01□□□□□ -0.65
TPM1-216ENST00000558910 OR5M10Q6IEU7 315 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 ARHGAP11AQ6P4F7 1023 aa11.01□□□□□ -0.65
TPM1-216ENST00000558910 GALNT18Q6P9A2 607 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms