RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CHST10O43529 356 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 FOXD2O60548 495 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SEC24DO94855 1032 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CLPTM1O96005 669 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 NR2F1P10589 423 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ETS2P15036 469 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ATP6V1B1P15313 513 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CLK3P49761 638 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CRISP3P54108 245 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ISL1P61371 349 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CTU2Q2VPK5 515 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TRMT12Q53H54 448 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TTC23Q5W5X9 447 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TCTN3Q6NUS6 607 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 GALNT5Q7Z7M9 940 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SLC16A11Q8NCK7 471 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TSPAN14Q8NG11 270 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF675Q8TD23 568 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 COL26A1Q96A83 441 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CTHRC1Q96CG8 243 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SLC35A4Q96G79 324 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF354BQ96LW1 612 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PSD2Q9BQI7 771 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ACTRT3Q9BYD9 372 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 EPB41L1Q9H4G0 881 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ANKHQ9HCJ1 492 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 DDX18Q9NVP1 670 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 MAT2BQ9NZL9 334 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SEMA5BQ9P283 1151 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PTGFRNQ9P2B2 879 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ACAD8Q9UKU7 415 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 C19orf53Q9UNZ5 99 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CHST2Q9Y4C5 530 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TMEM184BQ9Y519 407 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 IFNW1P05000 195 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 IFI6P09912 130 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CT62P0C5K7 136 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ITGA2P17301 1181 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 RHCEP18577 417 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ELK4P28324 431 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 MAP3K8P41279 467 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 RAD23AP54725 363 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CDH12P55289 794 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SPIBQ01892 262 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 FAM53BQ14153 422 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PRICKLE4Q2TBC4 344 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF691Q5VV52 312 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 DGAT2L6Q6ZPD8 337 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TMPRSS9Q7Z410 1059 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 HMGN2P46Q86SG4 172 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SATL1Q86VE3 508 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PLXDC1Q8IUK5 500 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 DOK4Q8TEW6 326 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 TANKQ92844 425 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZG16BQ96DA0 208 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZDHHC12Q96GR4 267 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF607Q96SK3 696 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 CD180Q99467 661 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 QRSL1Q9H0R6 528 aaKnown RBP12.1□□□□□ -0.47
SMAD3-207ENST00000558763 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 PLCL2Q9UPR0 1127 aa12.1□□□□□ -0.47
SMAD3-207ENST00000558763 MN1Q10571 1320 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 A0A087WV62 115 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 A8MU76 341 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 PLOD3O60568 738 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 CPNE6O95741 557 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ACP2P11117 423 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ACP1P24666 158 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 PPP2R1BP30154 601 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 MLLT3P42568 568 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 RPL5P46777 297 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 GCGRP47871 477 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 CD47Q08722 323 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 DUSP8Q13202 625 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 RAPSNQ13702 412 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 KCNAB1Q14722 419 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ZNF770Q6IQ21 691 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 SLC5A8Q8N695 610 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 CHDHQ8NE62 594 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 OR52J3Q8NH60 311 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 TRNT1Q96Q11 434 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FUZQ9BT04 418 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 GABARAPL3Q9BY60 117 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 RBM38Q9H0Z9 239 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 LRRN3Q9H3W5 708 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms