RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.16□□□□□ -1.42
IDH3A-206ENST00000558535 GAR1Q9NY12 217 aaKnown RBP6.16□□□□□ -1.42
IDH3A-206ENST00000558535 BARHL2Q9NY43 387 aa6.16□□□□□ -1.42
IDH3A-206ENST00000558535 PDP1Q9P0J1 537 aaPredicted RBP6.16□□□□□ -1.42
IDH3A-206ENST00000558535 RPH3ALQ9UNE2 315 aa6.16□□□□□ -1.42
IDH3A-206ENST00000558535 KIAA1024Q9UPX6 916 aa6.16□□□□□ -1.42
IDH3A-206ENST00000558535 AAR2Q9Y312 384 aaKnown RBP6.16□□□□□ -1.42
IDH3A-206ENST00000558535 GPR45Q9Y5Y3 372 aa6.16□□□□□ -1.42
IDH3A-206ENST00000558535 ABHD14A-ACY1A0A1B0GW23 586 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MEX3AA1L020 520 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 URADA6NGE7 173 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SEC14L6B5MCN3 397 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TMEM238C9JI98 176 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 F8VP50 259 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 HAS3O00219 553 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TP53I11O14683 189 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MEIS2O14770 477 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 KHDRBS3O75525 346 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 GLCEO94923 617 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PRAMEF1O95521 474 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 FADS2O95864 444 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CXCL10P02778 98 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MT-ND1P03886 318 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MPOP05164 745 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 HOXB5P09067 269 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 GAAP10253 952 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SELPP16109 830 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 BMP7P18075 431 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 HOXA5P20719 270 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ABCD3P28288 659 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 HTR1EP28566 365 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SSTR1P30872 391 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 FMO3P31513 532 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SFNP31947 248 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MSX2P35548 267 aaPredicted RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PPP3R1P63098 170 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PDZK1IP1Q13113 114 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TRAM1Q15629 374 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ZNF79Q15937 498 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MEDAGQ5VYS4 303 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ZNF470Q6ECI4 717 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 FIGNL1Q6PIW4 674 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ATRAIDQ6UW56 229 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PAMR1Q6UXH9 720 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CDHR3Q6ZTQ4 885 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PIWIL4Q7Z3Z4 852 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MYPOPQ86VE0 399 aaPredicted RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ATCAYQ86WG3 371 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CFAP206Q8IYR0 622 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ACBD7Q8N6N7 88 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.15□□□□□ -1.422e-20■■■■■ 39.5
IDH3A-206ENST00000558535 TRMT10AQ8TBZ6 339 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TMEM163Q8TC26 289 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CPT1CQ8TCG5 803 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 OIT3Q8WWZ8 545 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CMBLQ96DG6 245 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PDCD2LQ9BRP1 358 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 POTEKPQ9BYX7 375 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PRRG3Q9BZD7 231 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 HAPLN2Q9GZV7 340 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TASP1Q9H6P5 420 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ITM2CQ9NQX7 267 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 POT1Q9NUX5 634 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 VNN3Q9NY84 501 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 STARD10Q9Y365 291 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TEX264Q9Y6I9 313 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ZNF638Q14966 1978 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SCN10AQ9Y5Y9 1956 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SLC5A10A0PJK1 596 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 FABP12A6NFH5 140 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MDM4O15151 490 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PLA2G10O15496 165 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PPIHO43447 177 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MBTPS2O43462 519 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 AP2A1O95782 977 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SERPINA1P01009 418 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 IL1AP01583 271 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CD2P06729 351 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SULT1A3P0DMM9 295 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SULT1A4P0DMN0 295 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 ZNF25P17030 456 aaPredicted RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 TBXA2RP21731 343 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 BCKDHBP21953 392 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 AHCYP23526 432 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 DNAJA1P31689 397 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 GDNFP39905 211 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 SLC1A2P43004 574 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 MRPL19P49406 292 aaKnown RBP6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PSEN2P49810 448 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 KCNQ1P51787 676 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 PCLAFQ15004 111 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 GOLGA7BQ2TAP0 167 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 NDUFAF6Q330K2 333 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 EOGTQ5NDL2 527 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 C10orf120Q5SQS8 335 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 LRIF1Q5T3J3 769 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 FBXW9Q5XUX1 488 aa6.15□□□□□ -1.42
IDH3A-206ENST00000558535 CNKSR3Q6P9H4 555 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms