RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 F10P00742 488 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 C15orf52Q6ZUT6 534 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 BCDIN3DQ7Z5W3 292 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ADAMTSL2Q86TH1 951 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ARFGAP1Q8N6T3 406 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR4E2Q8NGC2 313 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CREB3L4Q8TEY5 395 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LRIG1Q96JA1 1093 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF582Q96NG8 517 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR4K3Q96R72 315 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ZDHHC5Q9C0B5 715 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CRTAC1Q9NQ79 661 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ATXN7L1Q9ULK2 861 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 HEATR1Q9H583 2144 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 A0A1B0GTW7 788 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 A0A1B0GVT2 93 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 IL1AP01583 271 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NR2C1P13056 603 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GRM7Q14831 915 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LILRB1Q8NHL6 650 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GRHL3Q8TE85 626 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GLYATL2Q8WU03 294 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SGK3Q96BR1 496 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TSGA13Q96PP4 275 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NPAS1Q99742 590 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ST6GALNAC4Q9H4F1 302 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ALKBH4Q9NXW9 302 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MED13LQ71F56 2210 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 HTR1AP08908 422 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RPS25P62851 125 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NIPA2Q8N8Q9 360 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR4K13Q8NH42 304 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MCHR1Q99705 422 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MED18Q9BUE0 208 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SC5DO75845 299 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RAB6CQ53S08 254 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LRFN4Q6PJG9 635 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TPRA1Q86W33 373 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 IL12RB2Q99665 862 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 DERL2Q9GZP9 239 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RAB6CQ9H0N0 254 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MKKSQ9NPJ1 570 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SETD1BQ9UPS6 1966 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3DA0A087WVF3 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3IA0A087WXS9 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3EA0A087X179 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3KA0A087X1G2 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 A0A0B4J203 849 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3FA6NER0 549 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LRRC72A6NJI9 287 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3LB9A6J9 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NME4O00746 187 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 IGFBP1P08833 259 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ALDOCP09972 364 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3HP0C7X1 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3GQ6DHY5 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3CQ6IPX1 549 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RIMKLAQ8IXN7 391 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TBC1D3Q8IZP1 549 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SELENOIQ9C0D9 397 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MRM3Q9HC36 420 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NUDT4Q9NZJ9 180 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SLC27A6Q9Y2P4 619 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 V9GY05 133 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 DAPK1P53355 1430 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 YEATS2Q9ULM3 1422 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TLR5O60602 858 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LRRC15Q8TF66 581 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SUCNR1Q9BXA5 334 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 KIAA2026Q5HYC2 2103 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 A0A0B4J2A0 478 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GATCO43716 136 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 HAAOP46952 286 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SIRPAP78324 504 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 PROX2Q3B8N5 592 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 NLGN4XQ8N0W4 816 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR2AP1Q8NGE2 309 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CLEC4DQ8WXI8 215 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TRMT61BQ9BVS5 477 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SRRQ9GZT4 340 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SHPKQ9UHJ6 478 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR5H14A6NHG9 310 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 JUNP05412 331 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LAP3P28838 519 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RPS26P62854 115 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM132BQ14DG7 1078 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR51L1Q8NGJ5 315 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR2A12Q8NGT7 310 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LCN9Q8WX39 176 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SLC39A9Q9NUM3 307 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ITGAMP11215 1152 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 UGT2B7P16662 529 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SRMP19623 302 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 MAP2K6P52564 334 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 COL19A1Q14993 1142 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 EIF4HQ15056 248 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 LCTLQ6UWM7 567 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms