RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZNF615Q8N8J6 731 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 SIMC1Q8NDZ2 872 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 B3GNT7Q8NFL0 401 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 OR5D16Q8NGK9 328 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 OR1N1Q8NGS0 311 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 C16orf52Q8NHV5 167 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 FBXO30Q8TB52 745 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 FIG4Q92562 907 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 RAB8BQ92930 207 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 NKD1Q969G9 470 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 NCLNQ969V3 563 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 FAM122AQ96E09 287 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 LMF2Q9BU23 707 aaKnown RBP15.69■□□□□ 0.1
SNX1-203ENST00000558040 PIGUQ9H490 435 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 DUSP22Q9NRW4 184 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 LIPT1Q9Y234 373 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 PCDHGA6Q9Y5G7 932 aa15.69■□□□□ 0.1
SNX1-203ENST00000558040 IGHV3-20A0A0C4DH32 117 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 TERTO14746 1132 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 AK1P00568 194 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 POLE2P56282 527 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 ACTR3P61158 418 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 MS4A2Q01362 244 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 EEF1A2Q05639 463 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 KPNB1Q14974 876 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 MTX3Q5HYI7 312 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 EXOSC6Q5RKV6 272 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 LCN8Q6JVE9 175 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 SLC29A4Q7RTT9 530 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 C16orf62Q7Z3J2 963 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 DTX1Q86Y01 620 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 C10orf67Q8IYJ2 551 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 SLC16A11Q8NCK7 471 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 HIPK4Q8NE63 616 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 NFKBIDQ8NI38 313 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 WDR60Q8WVS4 1066 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 HOXB13Q92826 284 aaPredicted RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 POP5Q969H6 163 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 MAL2Q969L2 176 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 C8orf44Q96CB5 159 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 VMP1Q96GC9 406 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 NSMCE2Q96MF7 247 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 VSTM2LQ96N03 204 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 EFHD1Q9BUP0 239 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 ZNF700Q9H0M5 742 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 CALML5Q9NZT1 146 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 PPIEQ9UNP9 301 aaKnown RBP15.68■□□□□ 0.1
SNX1-203ENST00000558040 HS3ST3B1Q9Y662 390 aa15.68■□□□□ 0.1
SNX1-203ENST00000558040 LOC101059948A0A1B0GTJ6 334 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 A0A1W2PQ72 361 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 SLC28A2O43868 658 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 SEC24DO94855 1032 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 NKX2-2O95096 273 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 CLPSP04118 112 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 BCHEP06276 602 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 NR2F1P10589 423 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 ACP2P11117 423 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 NCK1P16333 377 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 OTX2P32243 289 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 CRISP3P54108 245 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 DCAF7P61962 342 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 RPS18P62269 152 aaKnown RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 HPCAP84074 193 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 MYBPC3Q14896 1274 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 EXT1Q16394 746 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 DUSP5Q16690 384 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 FAM69BQ5VUD6 431 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 HLA-DQA1Q5Y7H0 255 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 REEP3Q6NUK4 255 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 RAB43Q86YS6 212 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 SLC44A2Q8IWA5 706 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 COX18Q8N8Q8 333 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 GPR151Q8TDV0 419 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 SLC38A5Q8WUX1 472 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 FAM162AQ96A26 154 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 OTUB1Q96FW1 271 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 SLC35A4Q96G79 324 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 WDR77Q9BQA1 342 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 NUDT9Q9BW91 350 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 DENND2DQ9H6A0 471 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 GORASP2Q9H8Y8 452 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 GPN2Q9H9Y4 310 aaPredicted RBP15.67■□□□□ 0.1
SNX1-203ENST00000558040 Q9N2J8 555 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 CEP250Q9BV73 2442 aa15.67■□□□□ 0.1
SNX1-203ENST00000558040 IGHV1-45A0A0A0MS14 117 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 TRABD2BA6NFA1 517 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 AQP12BA6NM10 295 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 SOCS6O14544 535 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 CREG1O75629 220 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 PDE9AO76083 593 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 TFPTP0C1Z6 253 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 GABRA3P34903 492 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 MAP3K8P41279 467 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 SLC26A5P58743 744 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 ELF3P78545 371 aaPredicted RBP15.66■□□□□ 0.1
SNX1-203ENST00000558040 PCOLCEQ15113 449 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 GPAT3Q53EU6 434 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 PRAMEF8Q5VWM4 474 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 PRAMEF7Q5VXH5 474 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms