RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR14L1PQ8NHC6 308 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 WDYHV1Q96HA8 205 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 ZFP3Q96NJ6 502 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 COL21A1Q96P44 957 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 ITPAQ9BY32 194 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 SHCBP1LQ9BZQ2 653 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 EPB41L4BQ9H329 900 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 PLLPQ9Y342 182 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 NCKAP5O14513 1909 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 ITPR3Q14573 2671 aa12.42□□□□□ -0.42
SNRPA1-204ENST00000558020 MBD3L4A6NDZ8 208 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 MBD3L3A6NE82 208 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 FRG2CA6NGY1 282 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 MBD3L5A6NJ08 208 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 A6NNC1 897 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 PPP6CO00743 305 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 SNPHO15079 494 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 TO15178 435 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 EPXP11678 715 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 IMPDH1P20839 514 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ATP5F1P24539 256 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 GSTM5P46439 218 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 EMDP50402 254 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 DGKQP52824 942 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ACSM2AQ08AH3 577 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 EFR3AQ14156 821 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 DAZAP2Q15038 168 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ACSM2BQ68CK6 577 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 AAGABQ6PD74 315 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 TRMT10CQ7L0Y3 403 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 YRDCQ86U90 279 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 CCDC116Q8IYX3 515 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 TMEM151AQ8N4L1 468 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 RELL2Q8NC24 303 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 NAXEQ8NCW5 288 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 MBD3L2Q8NHZ7 208 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF675Q8TD23 568 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 HGDQ93099 445 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 CNRIP1Q96F85 164 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF681Q96N22 645 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF382Q96SR6 550 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ACBD3Q9H3P7 528 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ST6GALNAC2Q9UJ37 374 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 DTX4Q9Y2E6 619 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 DLGAP4Q9Y2H0 992 aa12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 GPR55Q9Y2T6 319 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-204ENST00000558020 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PRAMEF25A6NGN4 478 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 EEF1E1-BLOC1S5C9J1V9 151 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 H0Y3Z8 333 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 EEF1E1O43324 174 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PCDH7O60245 1069 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 UGT2B11O75310 529 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 ERN1O75460 977 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 GOSR1O95249 250 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 CBX7O95931 251 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 ENO1P06733 434 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 CD99P14209 185 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PCSK2P16519 638 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 IL12BP29460 328 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF136P52737 540 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PKNOX1P55347 436 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PPP2R2AP63151 447 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 SORDQ00796 357 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 GAB1Q13480 694 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 SNTB1Q13884 538 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 ZNF678Q5SXM1 525 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 CAMKMTQ7Z624 323 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 IFNEQ86WN2 208 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 PLCZ1Q86YW0 608 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 TRIM42Q8IWZ5 723 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 NOA1Q8NC60 698 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 NRGNQ92686 78 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 TMBIM1Q969X1 311 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 CCDC126Q96EE4 140 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 NODALQ96S42 347 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 HBEGFQ99075 208 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 STMN4Q9H169 189 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 SERHLQ9NQF3 203 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 CCM2LQ9NUG4 571 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 TAS2R10Q9NYW0 307 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 TAS2R9Q9NYW1 312 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 MAPRE3Q9UPY8 281 aa12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 MRPS18CQ9Y3D5 142 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-204ENST00000558020 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
SNRPA1-204ENST00000558020 GSTA1P08263 222 aa12.39□□□□□ -0.43
SNRPA1-204ENST00000558020 ABHD2P08910 425 aa12.39□□□□□ -0.43
SNRPA1-204ENST00000558020 SBK3P0C264 359 aa12.39□□□□□ -0.43
SNRPA1-204ENST00000558020 TMIGD3P0DMS9 266 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms