RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NTNG1Q9Y2I2 539 aa3.43□□□□□ -1.86
CHD8-212ENST00000557329 KLF2Q9Y5W3 355 aaPredicted RBP3.43□□□□□ -1.86
CHD8-212ENST00000557329 SNX10Q9Y5X0 201 aa3.43□□□□□ -1.86
CHD8-212ENST00000557329 NIPBLQ6KC79 2804 aaeCLIP3.43□□□□□ -1.86
CHD8-212ENST00000557329 ZNF106Q9H2Y7 1883 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 NYNRINQ9P2P1 1898 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 C21orf140B9A014 251 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 BUB1O43683 1085 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CLDN11O75508 207 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 GRAP2O75791 330 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 GAS8-AS1O95177 125 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZWINTO95229 277 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 POP4O95707 220 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 TRUB2O95900 331 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 CALCAP01258 141 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 IGLV3-27P01718 113 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 AMBPP02760 352 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 NR3C1P04150 777 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 LIPFP07098 398 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 KLK3P07288 261 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 TRIM49P0CI25 452 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TRIM49CP0CI26 452 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CHRNB4P30926 498 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CCR1P32246 355 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CA5AP35218 305 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 SMSP52788 366 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 PLK1P53350 603 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ATP12AP54707 1039 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CDH4P55283 916 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 DCAF7P61962 342 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 SNRPD1P62314 119 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 CSNK1G2P78368 415 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 HMGN5P82970 282 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 INCA1Q0VD86 236 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 PEX6Q13608 980 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ITGA9Q13797 1035 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 NR1D2Q14995 579 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CLPPQ16740 277 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 C15orf59Q2T9L4 293 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 ASTE1Q2TB18 679 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 ALS2CLQ60I27 953 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 IRGCQ6NXR0 463 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 PMF1Q6P1K2 205 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 KLC3Q6P597 504 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CCDC73Q6ZRK6 1079 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 SYVN1Q86TM6 617 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZSCAN30Q86W11 494 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 HPS6Q86YV9 775 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TMEM126BQ8IUX1 230 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 CIARTQ8N365 385 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 BMPERQ8N8U9 685 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZNF524Q96C55 264 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZNF501Q96CX3 271 aaPredicted RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 MTERF3Q96E29 417 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ELMOD3Q96FG2 381 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 GBP5Q96PP8 586 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 SLX1AQ9BQ83 275 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZNF559Q9BR84 538 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 TBC1D10AQ9BXI6 508 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 MAK16Q9BXY0 300 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 BLZF1Q9H2G9 400 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 OSGEPL1Q9H4B0 414 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 ZNF696Q9H7X3 374 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 OLFML3Q9NRN5 406 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 FGF21Q9NSA1 209 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 SAMSN1Q9NSI8 373 aaKnown RBP3.42□□□□□ -1.86
CHD8-212ENST00000557329 OLAHQ9NV23 265 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 HS3ST2Q9Y278 367 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 PKDREJQ9NTG1 2253 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 AKAP9Q99996 3911 aa3.42□□□□□ -1.86
CHD8-212ENST00000557329 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 ELOVL7A1L3X0 281 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 MITFO75030 526 aaPredicted RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 OR2C1O95371 312 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 PIGNO95427 931 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 IGLV1-44P01699 117 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SLC2A3P11169 496 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 VDRP11473 427 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 VPREB1P12018 145 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 DNASE1P24855 282 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 CASP1P29466 404 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 HOXD13P35453 343 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SERPINH1P50454 418 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 GFERP55789 205 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 RHOAP61586 193 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 RBPJQ06330 500 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 ELP6Q0PNE2 266 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 KRT33BQ14525 404 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 IL11RAQ14626 422 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 KNOP1Q1ED39 458 aaKnown RBP3.41□□□□□ -1.86
CHD8-212ENST00000557329 GCNT6Q5T4J0 391 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 MLIPQ5VWP3 458 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 CES4AQ5XG92 561 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 ARHGAP17Q68EM7 881 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 RAET1GQ6H3X3 334 aa3.41□□□□□ -1.86
CHD8-212ENST00000557329 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms