RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 A6NNC1 897 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 TO15178 435 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 UGT2B11O75310 529 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 ULK1O75385 1050 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 DRD2P14416 443 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 CPN1P15169 458 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 IMPDH1P20839 514 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 OPRM1P35372 400 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 CSTF3Q12996 717 aaKnown RBP14.48□□□□□ -0.09
TUBB3-213ENST00000557262 RCAN2Q14206 197 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 DAZAP2Q15038 168 aaPredicted RBP14.48□□□□□ -0.09
TUBB3-213ENST00000557262 ZNF678Q5SXM1 525 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 DCST1Q5T197 706 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 KIF18BQ86Y91 864 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 GOT1L1Q8NHS2 421 aaPredicted RBP14.48□□□□□ -0.09
TUBB3-213ENST00000557262 ZNF675Q8TD23 568 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 TMCO6Q96DC7 493 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 CXXC4Q9H2H0 198 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 LIME1Q9H400 295 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 GALNT9Q9HCQ5 603 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 KLRF1Q9NZS2 232 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 TMEM216Q9P0N5 145 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 DLGAP4Q9Y2H0 992 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 GPR55Q9Y2T6 319 aaPredicted RBP14.48□□□□□ -0.09
TUBB3-213ENST00000557262 MTORP42345 2549 aa14.48□□□□□ -0.09
TUBB3-213ENST00000557262 EXOC1LA0A1B0GW35 172 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 DLX3O60479 287 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 REM1O75628 298 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 IL18BPO95998 194 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 CTAGE8P0CG41 777 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 CYP4B1P13584 511 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 CHN1P15882 459 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 PCSK2P16519 638 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 MRPS35P82673 323 aaKnown RBP14.47□□□□□ -0.09
TUBB3-213ENST00000557262 LTB4RQ15722 352 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 TCHHL1Q5QJ38 904 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-213ENST00000557262 FAM219BQ5XKK7 198 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 ENPP6Q6UWR7 440 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 GPRIN3Q6ZVF9 776 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 LCA5Q86VQ0 697 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 CTAGE4Q8IX94 777 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 SAMD14Q8IZD0 417 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-213ENST00000557262 GBP7Q8N8V2 638 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-213ENST00000557262 WDSUB1Q8N9V3 476 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 METTL6Q8TCB7 284 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 ZNF592Q92610 1267 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 ERP27Q96DN0 273 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 MTBPQ96DY7 904 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 ZNF382Q96SR6 550 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 SERHLQ9NQF3 203 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 PFDN4Q9NQP4 134 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 ST6GALNAC2Q9UJ37 374 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 MAPRE3Q9UPY8 281 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 AKAP6Q13023 2319 aa14.47□□□□□ -0.09
TUBB3-213ENST00000557262 PRAMEF25A6NGN4 478 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 TUBAL3A6NHL2 446 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 OR6C70A6NIJ9 312 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 ABCB7O75027 752 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 IL3P08700 152 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 EPXP11678 715 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 CD99P14209 185 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 ATP5F1P24539 256 aaPredicted RBP14.46□□□□□ -0.09
TUBB3-213ENST00000557262 HMOX2P30519 316 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 AGFG1P52594 562 aaKnown RBP14.46□□□□□ -0.09
TUBB3-213ENST00000557262 RAE1P78406 368 aaKnown RBP14.46□□□□□ -0.09
TUBB3-213ENST00000557262 ZNF628Q5EBL2 1059 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 CDC20BQ86Y33 519 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 PLCZ1Q86YW0 608 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 TRIM42Q8IWZ5 723 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 CHDHQ8NE62 594 aaPredicted RBP14.46□□□□□ -0.09
TUBB3-213ENST00000557262 OR14L1PQ8NHC6 308 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 TMBIM1Q969X1 311 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 RMND5BQ96G75 393 aaPredicted RBP14.46□□□□□ -0.09
TUBB3-213ENST00000557262 COL21A1Q96P44 957 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 OR2B2Q9GZK3 357 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 JKAMPQ9P055 326 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 CBLCQ9ULV8 474 aa14.46□□□□□ -0.09
TUBB3-213ENST00000557262 ITPR3Q14573 2671 aa14.46□□□□□ -0.1
TUBB3-213ENST00000557262 ANKHD1Q8IWZ3 2542 aaKnown RBP14.45□□□□□ -0.1
TUBB3-213ENST00000557262 GNG14A0A1W2PPG7 69 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 PCDH7O60245 1069 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 ABHD2P08910 425 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 CT45A8P0DMV1 189 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 CT45A9P0DMV2 189 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 DNASE1P24855 282 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 TACR1P25103 407 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 GCAP28676 217 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 SLCO1A2P46721 670 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 PRKAA2P54646 552 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 HMGCS1Q01581 520 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 ACSM2AQ08AH3 577 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 HEPACAMQ14CZ8 416 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 SPIN4Q56A73 249 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 CT45A2Q5DJT8 189 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 ACSM2BQ68CK6 577 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 SLC22A9Q8IVM8 553 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 C9orf106Q8NAJ2 232 aa14.45□□□□□ -0.1
TUBB3-213ENST00000557262 RDH11Q8TC12 318 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms