RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SNAP47Q5SQN1 464 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 CCNJQ5T5M9 372 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 OR2L13Q8N349 312 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC25A45Q8N413 288 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 PEX11GQ96HA9 241 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 PTTG2Q9NZH5 202 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 WDFY4Q6ZS81 3184 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC1A7O00341 560 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ANGPTL1O95841 491 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 HMGA2P52926 109 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 IL18R1Q13478 541 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 SEC23BQ15437 767 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 DUSP5Q16690 384 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 PRTGQ2VWP7 1150 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF311Q5JNZ3 666 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 WDR45BQ5MNZ6 344 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 OGFOD3Q6PK18 319 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 DGAT2L6Q6ZPD8 337 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 TSPYL5Q86VY4 417 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 LSRQ86X29 649 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 NLGN4XQ8N0W4 816 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 SETD9Q8NE22 299 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 OR6T1Q8NGN1 323 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ANKRD9Q96BM1 317 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 AHCYL2Q96HN2 611 aaKnown RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 UCK1Q9HA47 277 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF556Q9HAH1 456 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 GIN1Q9NXP7 522 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 KCND3Q9UK17 655 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 HCN4Q9Y3Q4 1203 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 WDR87Q6ZQQ6 2873 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 FOXS1O43638 330 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ANXA8P13928 327 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 RNF144AP50876 292 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 RAB38P57729 211 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 TMED1Q13445 227 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 FAM214AQ32MH5 1076 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF773Q6PK81 442 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR141Q7Z602 305 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 APOL4Q9BPW4 351 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 SPATA5L1Q9BVQ7 753 aa17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 SPRTNQ9H040 489 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 PAK1IP1Q9NWT1 392 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR55Q9Y2T6 319 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-220ENST00000556548 THADAQ6YHU6 1953 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 A8MVJ9 347 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ALPPP05187 535 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ACP2P11117 423 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 DHPSP49366 369 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ESRRGP62508 458 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 CDC73Q6P1J9 531 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 B3GNT8Q7Z7M8 397 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 TANKQ92844 425 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 RHNO1Q9BSD3 238 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 CCDC90BQ9GZT6 254 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 FSCN3Q9NQT6 498 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 PCDHGA6Q9Y5G7 932 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 PCDH15Q96QU1 1955 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 CLDN24A6NM45 220 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ASNA1O43681 348 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 SRPX2O60687 465 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 LGI1O95970 557 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ATP1B1P05026 303 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 H1F0P07305 194 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 HTR1AP08908 422 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF24P17028 368 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 ELAVL4P26378 380 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 HOXC5Q00444 222 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC13A2Q13183 592 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 PIK3R3Q92569 461 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 RNF31Q96EP0 1072 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 TRNT1Q96Q11 434 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 BTBD2Q9BX70 525 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 GABARAPL3Q9BY60 117 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 FANCEQ9HB96 536 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 TMEM9Q9P0T7 183 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 NTMQ9P121 344 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 TMCC3Q9ULS5 477 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 A4GNTQ9UNA3 340 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 POFUT2Q9Y2G5 429 aa17.12■□□□□ 0.33
SDR39U1-220ENST00000556548 HYKKA2RU49 373 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 M0R129 80 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 PCDHGA12O60330 932 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 OR10H2O60403 315 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 ZBTB11O95625 1053 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 PRICKLE4Q2TBC4 344 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 FHL5Q5TD97 284 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 BROXQ5VW32 411 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 TMEM236Q5W0B7 351 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC35F3Q8IY50 421 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 ADAMTS16Q8TE57 1224 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 ABTB1Q969K4 478 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 MMABQ96EY8 250 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 PDE7BQ9NP56 450 aa17.11■□□□□ 0.33
SDR39U1-220ENST00000556548 MAT2BQ9NZL9 334 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms