RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 RTCAO00442 366 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 DVL2O14641 736 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 EEF1E1O43324 174 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 DYRK3O43781 588 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 FGF17O60258 216 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 CBX7O95931 251 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 RFPL3SP0C7P2 107 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 TNNI3P19429 210 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SSTR1P30872 391 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PIGAP37287 484 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 MSH2P43246 934 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 ASPHQ12797 758 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 ODF1Q14990 250 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 AP5B1Q2VPB7 878 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 FBXL19-AS1Q494R0 122 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SHEQ5VZ18 495 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 OR4C11Q6IEV9 310 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 GRHL2Q6ISB3 625 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 CCDC91Q7Z6B0 441 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SPATA6LQ8N4H0 392 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SNX31Q8N9S9 440 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PERPQ96FX8 193 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 RBM18Q96H35 190 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 DGAT2Q96PD7 388 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PELOQ9BRX2 385 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 ZNF717Q9BY31 904 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 EPB41L4BQ9H329 900 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 RPF2Q9H7B2 306 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PROK2Q9HC23 129 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 BEX4Q9NWD9 120 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 MKS1Q9NXB0 559 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PSD3Q9NYI0 1048 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 NUDT4Q9NZJ9 180 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 CD274Q9NZQ7 290 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 TXNDC16Q9P2K2 825 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 PHF11Q9UIL8 331 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 BOKQ9UMX3 212 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SAR1BQ9Y6B6 198 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 CHCHD2Q9Y6H1 151 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.16□□□□□ -0.94
SCFD1-220ENST00000556486 FREM3P0C091 2139 aa9.16□□□□□ -0.94
SCFD1-220ENST00000556486 CHD3Q12873 2000 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 OR6C76A6NM76 312 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 HSPB2A8KAH6 182 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 PLPP1O14494 284 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 ARHGEF9O43307 516 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 CCNT2O60583 730 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 UGDHO60701 494 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SMPD2O60906 423 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 KERAO60938 352 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 PIAS1O75925 651 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 HRGP04196 525 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SLC35E2BP0CK96 405 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 MTHFD2P13995 350 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 CPN2P22792 545 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SPRP35270 261 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SSR2P43308 183 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SLC37A1P57057 533 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 TNFRSF17Q02223 184 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SLAMF1Q13291 335 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 CUL3Q13618 768 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 HSPB2Q16082 182 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 NTRK2Q16620 822 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 FBXO48Q5FWF7 155 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 C10orf62Q5T681 223 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 GRTP1Q5TC63 336 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 PRAMEF20Q5VT98 475 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 METTL2BQ6P1Q9 378 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 YTHDF3Q7Z739 585 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 GPR180Q86V85 440 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 ZNF441Q8N8Z8 693 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SIMC1Q8NDZ2 872 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 HUS1BQ8NHY5 278 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 RHEBL1Q8TAI7 183 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 NEIL3Q8TAT5 605 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 RGMAQ96B86 450 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 NTNG2Q96CW9 530 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 HSPBAP1Q96EW2 488 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SECISBP2Q96T21 854 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 KRT12Q99456 494 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 CENPKQ9BS16 269 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 ERP44Q9BS26 406 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 TRIM31Q9BZY9 425 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 KCNF1Q9H3M0 494 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 DDX31Q9H8H2 851 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 NMRAL1Q9HBL8 299 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 CNOT11Q9UKZ1 510 aaKnown RBP9.15□□□□□ -0.94
SCFD1-220ENST00000556486 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
SCFD1-220ENST00000556486 A0A0A6YYD5 115 aa9.14□□□□□ -0.95
SCFD1-220ENST00000556486 H0YIV9 168 aa9.14□□□□□ -0.95
SCFD1-220ENST00000556486 HRKO00198 91 aa9.14□□□□□ -0.95
SCFD1-220ENST00000556486 TRIM3O75382 744 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-220ENST00000556486 GPR75O95800 540 aa9.14□□□□□ -0.95
SCFD1-220ENST00000556486 TGFB1P01137 390 aa9.14□□□□□ -0.95
SCFD1-220ENST00000556486 CLPSP04118 112 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms