RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ITGA10O75578 1167 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 OR2J2O76002 312 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 KRT34O76011 436 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 HMGN2P05204 90 aaKnown RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 NAGAP17050 411 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 GABRA3P34903 492 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SOX11P35716 441 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ZFP36L2P47974 494 aaKnown RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 CYB561P49447 251 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 KHKP50053 298 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 EMDP50402 254 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 MNAT1P51948 309 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ARG2P78540 354 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 RAPSNQ13702 412 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 NFYCQ13952 458 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 LASP1Q14847 261 aaKnown RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 TLR1Q15399 786 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 CYP27C1Q4G0S4 372 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 PIGGQ5H8A4 983 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ATAD3BQ5T9A4 648 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 B3GNTL1Q67FW5 361 aaPredicted RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 FCRLBQ6BAA4 426 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 MFSD12Q6NUT3 480 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 CDC73Q6P1J9 531 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SLC2A7Q6PXP3 512 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 DNAJC14Q6Y2X3 702 aaPredicted RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 LINC00696Q6ZRV3 163 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 C6orf120Q7Z4R8 191 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SNX32Q86XE0 403 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SLC44A2Q8IWA5 706 aaPredicted RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 DPP10Q8N608 796 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 COX18Q8N8Q8 333 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 GPR151Q8TDV0 419 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SLC9A6Q92581 669 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 GTF2H4Q92759 462 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ADIPOR1Q96A54 375 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 TMEM125Q96AQ2 219 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 NEURL3Q96EH8 262 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ABHD17AQ96GS6 310 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SLC35G5Q96KT7 338 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SGCZQ96LD1 299 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 VSTM2LQ96N03 204 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 BTBD9Q96Q07 612 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 STACQ99469 402 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SH3GL1Q99961 368 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 INPP5KQ9BT40 448 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 LMF2Q9BU23 707 aaKnown RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 ITPAQ9BY32 194 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 MYLK2Q9H1R3 596 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 EFCAB1Q9HAE3 211 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 EQTNQ9NQ60 294 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 SERHLQ9NQF3 203 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 DUSP22Q9NRW4 184 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 EXD2Q9NVH0 621 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 HPF1Q9NWY4 346 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 THUMPD1Q9NXG2 353 aaKnown RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 GIN1Q9NXP7 522 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 CORO2BQ9UQ03 480 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 ERVK-11Q9UQG0 969 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 GPR55Q9Y2T6 319 aaPredicted RBP7.07□□□□□ -1.28
TDP1-214ENST00000556063 USP24Q9UPU5 2620 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 RP1L1Q8IWN7 2480 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 C15orf38-AP3S2A0A0A6YYH1 394 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 OR5H15A6NDH6 313 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TMEM247A6NEH6 219 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 CLIC1O00299 241 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TP53I11O14683 189 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 MRASO14807 208 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TO15178 435 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ASNA1O43681 348 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PRKNO60260 465 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 REM1O75628 298 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 NKX2-2O95096 273 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PSMG1O95456 288 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 AK1P00568 194 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 CLPSP04118 112 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 GSNP06396 782 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 COX4I1P13073 169 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 CD46P15529 392 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 MATN1P21941 496 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 IL12BP29460 328 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 SOX18P35713 384 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 HLCSP50747 726 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 PLCXD2Q0VAA5 305 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 FADDQ13158 208 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 DUSP8Q13202 625 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 ART3Q13508 389 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 EFR3AQ14156 821 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 GNA13Q14344 377 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 DECR1Q16698 335 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 TRMT5Q32P41 509 aaKnown RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 LACTB2Q53H82 288 aaPredicted RBP7.06□□□□□ -1.28
TDP1-214ENST00000556063 LRIF1Q5T3J3 769 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 SAXO2Q658L1 398 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 FAM91A1Q658Y4 838 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 IGFL2Q6UWQ7 119 aa7.06□□□□□ -1.28
TDP1-214ENST00000556063 IGFL3Q6UXB1 125 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms