RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CYP4B1P13584 511 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 STX2P32856 288 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 FEN1P39748 380 aaKnown RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 GAS1P54826 345 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CLDN15P56746 228 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 B3GALT5-AS1P59052 145 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PHEXP78562 749 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 HMGCS1Q01581 520 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SNTA1Q13424 505 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TOMM20Q15388 145 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CCDC91Q7Z6B0 441 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CCDC25Q86WR0 208 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TMEM151AQ8N4L1 468 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 WNT2BQ93097 391 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ISL2Q96A47 359 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 INTS12Q96CB8 462 aaKnown RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 MRRFQ96E11 262 aaKnown RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 MARK4Q96L34 752 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZFP3Q96NJ6 502 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 METTL7AQ9H8H3 244 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 GPR55Q9Y2T6 319 aaPredicted RBP13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TESMINQ9Y4I5 508 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 WIF1Q9Y5W5 379 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PLOD2O00469 737 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CBR3O75828 277 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CT45A8P0DMV1 189 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CT45A9P0DMV2 189 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PCSK2P16519 638 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZNF708P17019 499 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CCKARP32238 428 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PPICP45877 212 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 NKX6-1P78426 367 aaPredicted RBP13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SRYQ05066 204 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 RCAN2Q14206 197 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 GGTA1PQ4G0N0 100 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CT45A2Q5DJT8 189 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CCNYL2Q5T2Q4 361 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 LETMD1Q6P1Q0 360 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 NPSR1Q6W5P4 371 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 C22orf34Q6ZV56 151 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PHF21BQ96EK2 531 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 BRINP2Q9C0B6 783 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 NEUROD4Q9HD90 331 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZDHHC18Q9NUE0 388 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 HEY2Q9UBP5 337 aa13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TNPO3Q9Y5L0 923 aaKnown RBP13.01□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CUBNO60494 3623 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 COL6A5A8TX70 2615 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 A0A1W2PNV4 684 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 C1orf226A1L170 272 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PRAMEF25A6NGN4 478 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ACOX3O15254 700 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TSPAN2O60636 221 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CDH16O75309 829 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 LY6G6DO95868 133 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PDYNP01213 254 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 RPS17P08708 135 aaKnown RBP13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 DRD5P21918 477 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CCNG1P51959 295 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 RPP38P78345 283 aaKnown RBP13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PLCXD2Q0VAA5 305 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 OR4F6Q8NGB9 312 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 OR52R1Q8NGF1 315 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 RDH11Q8TC12 318 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TMBIM1Q969X1 311 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 STARD4Q96DR4 205 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SLC35A4Q96G79 324 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TM9SF2Q99805 663 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 YIPF4Q9BSR8 244 aa13□□□□□ -0.33
CHMP4BP1-201ENST00000556017 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 OR6C70A6NIJ9 312 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 STX16-NPEPL1H3BU86 382 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 STX16O14662 325 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ERN1O75460 977 aaKnown RBP12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 HEXAP06865 529 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TYK2P29597 1187 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SRD5A2P31213 254 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 PCYT1AP49585 367 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 MAPK12P53778 367 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CORO7P57737 925 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CAV1Q03135 178 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 FAM27E3Q08E93 113 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SGO1Q5FBB7 561 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 VWA1Q6PCB0 445 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZNF474Q6S9Z5 364 aaPredicted RBP12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 CLEC9AQ6UXN8 241 aa12.99□□□□□ -0.33
CHMP4BP1-201ENST00000556017 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms