RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 M1APQ8TC57 530 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 MIPOL1Q8TD10 442 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SLC26A7Q8TE54 656 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 C8orf44Q96CB5 159 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SLC7A6OSQ96CW6 309 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SPATA5L1Q9BVQ7 753 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 DEFB126Q9BYW3 111 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 AKIRIN1Q9H9L7 192 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 A4GALTQ9NPC4 353 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 P4HTMQ9NXG6 502 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SLAMF8Q9P0V8 285 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 DCHS1Q96JQ0 3298 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 CPAMD8Q8IZJ3 1885 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 IGHV3-20A0A0C4DH32 117 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 A0A1W2PQ72 361 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CDC14CA4D256 554 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 FRG2CA6NGY1 282 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 GSC2O15499 205 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 KLK10O43240 276 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PDE5AO76074 875 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ZFAND5O76080 213 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 DDAH2O95865 285 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CBX7O95931 251 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 BCHEP06276 602 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CT62P0C5K7 136 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ETFAP13804 333 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CD1EP15812 388 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 HOXB9P17482 250 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 TCN1P20061 433 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SPINK2P20155 84 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PCGF2P35227 344 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 GSK3BP49841 420 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SLC37A1P57057 533 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 POU6F2P78424 691 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 AIMP2Q13155 320 aaKnown RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CLN3Q13286 438 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 IL10RAQ13651 578 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SCARB2Q14108 478 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 FLOT2Q14254 428 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PCOLCEQ15113 449 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 DECR1Q16698 335 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 MTX3Q5HYI7 312 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 FHL5Q5TD97 284 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 JMJD6Q6NYC1 403 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ASRGL1Q7L266 308 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PPP1R32Q7Z5V6 425 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 VASH2Q86V25 355 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PROSER1Q86XN7 944 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SLC44A2Q8IWA5 706 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 MSRB3Q8IXL7 192 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SLC15A3Q8IY34 581 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 MICU2Q8IYU8 434 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF527Q8NB42 609 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 HIPK4Q8NE63 616 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 C17orf47Q8NEP4 570 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 FBXO27Q8NI29 283 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SNIP1Q8TAD8 396 aaKnown RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 BBS10Q8TAM1 723 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 NUBPLQ8TB37 319 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 XAGE5Q8WWM1 108 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 RASSF5Q8WWW0 418 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 STMN2Q93045 179 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 RNF145Q96MT1 663 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF607Q96SK3 696 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 YIPF4Q9BSR8 244 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 LMF2Q9BU23 707 aaKnown RBP10.41□□□□□ -0.74
SHMT2-220ENST00000555634 BTBD2Q9BX70 525 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 WWTR1Q9GZV5 400 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 PIGUQ9H490 435 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 TMEM38AQ9H6F2 299 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ARMC7Q9H6L4 198 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF160Q9HCG1 818 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 MMP25Q9NPA2 562 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SLC6A13Q9NSD5 602 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 GPATCH2Q9NW75 528 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF639Q9UID6 485 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SLC13A4Q9UKG4 626 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 CLDN16Q9Y5I7 305 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SNX13Q9Y5W8 968 aa10.41□□□□□ -0.74
SHMT2-220ENST00000555634 SOCS6O14544 535 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 TERTO14746 1132 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 SERPINB7O75635 380 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PSMG1O95456 288 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 IGKV3-11P04433 115 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 BMP2P12643 396 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 HPGDP15428 266 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 NQO1P15559 274 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 HTR1EP28566 365 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 GABRA3P34903 492 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CASRP41180 1078 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 PPICP45877 212 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RFX3P48380 749 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 UCNP55089 124 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RNF4P78317 190 aa10.4□□□□□ -0.74
SHMT2-220ENST00000555634 RPP38P78345 283 aaKnown RBP10.4□□□□□ -0.74
SHMT2-220ENST00000555634 CDK6Q00534 326 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms