RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ZNF350Q9GZX5 532 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 CAPN10Q9HC96 672 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 LANCL2Q9NS86 450 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 SATB2Q9UPW6 733 aa8.32□□□□□ -1.08
TDP1-210ENST00000554976 A0A0A6YYC8 382 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 HYKKA2RU49 373 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 I3L1I5 382 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 PCDH17O14917 1159 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SLC28A2O43868 658 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 HS6ST1O60243 411 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TPST2O60704 377 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 HTR1AP08908 422 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ITGA2P17301 1181 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ELK4P28324 431 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 EPHA2P29317 976 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TLX1P31314 330 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 GALNSP34059 522 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 CRISP3P54108 245 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 GPLD1P80108 840 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SEC23BQ15437 767 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 DUSP5Q16690 384 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 LIN52Q52LA3 116 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 NIPAL1Q6NVV3 410 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ZNF574Q6ZN55 896 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TMEM105Q8N8V8 129 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SPPL2AQ8TCT8 520 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 APH1BQ8WW43 257 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 RASSF5Q8WWW0 418 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ZG16BQ96DA0 208 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 RMND5BQ96G75 393 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 ZDHHC12Q96GR4 267 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 STACQ99469 402 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ZNF768Q9H5H4 540 aaKnown RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 KCNE5Q9UJ90 142 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 C3orf18Q9UK00 162 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 DOLKQ9UPQ8 538 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TESMINQ9Y4I5 508 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TNFRSF11BO00300 401 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SYT5O00445 386 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 MYF5P13349 255 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ELAVL4P26378 380 aaKnown RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 EEF1A1P68104 462 aaKnown RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 CHRNEQ04844 493 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 KCNAB1Q14722 419 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 BCL2A1Q16548 175 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TTC23Q5W5X9 447 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ZCCHC12Q6PEW1 402 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 NANOGNBQ7Z5D8 188 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 WDR53Q7Z5U6 358 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 SATL1Q86VE3 508 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 FAM181AQ8N9Y4 354 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 OR4C6Q8NH72 309 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 ADAMTS18Q8TE60 1221 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 CDS1Q92903 461 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SDCCAG3Q96C92 435 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 MAGED4Q96JG8 741 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 NIPSNAP1Q9BPW8 284 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 PIGUQ9H490 435 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 BAG5Q9UL15 447 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 LIPT1Q9Y234 373 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 GPR55Q9Y2T6 319 aaPredicted RBP8.31□□□□□ -1.08
TDP1-210ENST00000554976 HSPE1-MOB4S4R3N1 261 aa8.31□□□□□ -1.08
TDP1-210ENST00000554976 TECTAO75443 2155 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 IGKV3D-11A0A0A0MRZ8 115 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CENPVL1A0A0U1RR11 272 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 RHPN2P1A8MT19 583 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 STK25O00506 426 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ANKRD34CP0C6C1 535 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 GABRB1P18505 474 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CRHBPP24387 322 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 PRKAR1BP31321 381 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ID2Q02363 134 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CD47Q08722 323 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 RAPSNQ13702 412 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 SYT16Q17RD7 645 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 TCTE1Q5JU00 501 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 BORAQ6PGQ7 559 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 C1orf210Q8IVY1 113 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 SLC5A8Q8N695 610 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 MORN4Q8NDC4 146 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 TSPAN14Q8NG11 270 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 OR6C4Q8NGE1 309 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 OR1L3Q8NH93 324 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 XAGE5Q8WWM1 108 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 HDAC2Q92769 488 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 HRASLS5Q96KN8 279 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 COL21A1Q96P44 957 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 ZNF607Q96SK3 696 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 CCDC3Q9BQI4 270 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 QRSL1Q9H0R6 528 aaKnown RBP8.3□□□□□ -1.08
TDP1-210ENST00000554976 PDE7BQ9NP56 450 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 FSCN3Q9NQT6 498 aa8.3□□□□□ -1.08
TDP1-210ENST00000554976 PAK1IP1Q9NWT1 392 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms