RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 KLHL1Q9NR64 748 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 CCM2LQ9NUG4 571 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-214ENST00000554604 ADGRE2Q9UHX3 823 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 ERRFI1Q9UJM3 462 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-214ENST00000554604 DAPP1Q9UN19 280 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 MAPRE3Q9UPY8 281 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 OSGIN2Q9Y236 505 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 DLGAP4Q9Y2H0 992 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TSC22D4Q9Y3Q8 395 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 SPACA6W5XKT8 324 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 SYNDIG1LA6NDD5 238 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 ARPC2O15144 300 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 MAN1A2O60476 641 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 ERN1O75460 977 aaKnown RBP11.56□□□□□ -0.56
SHMT2-214ENST00000554604 IFNA16P05015 189 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 GPIP06744 558 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 UMPSP11172 480 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 S100A3P33764 101 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SSR2P43308 183 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 CLCN2P51788 898 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 PHEXP78562 749 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 STX4Q12846 297 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 BLMHQ13867 455 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 DPY19L1Q2PZI1 675 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 GRAMD1BQ3KR37 738 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SPANXN4Q5MJ08 99 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 LRIF1Q5T3J3 769 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 NOXRED1Q6NXP6 359 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 RIMKLAQ8IXN7 391 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 ACOT4Q8N9L9 421 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 TMEM178AQ8NBL3 297 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 B3GNT7Q8NFL0 401 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 OR52E6Q96RD3 313 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SH3GL1Q99961 368 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 RMND5AQ9H871 391 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 LYRM4Q9HD34 91 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 PRDM7Q9NQW5 492 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SIRT5Q9NXA8 310 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 SLAMF8Q9P0V8 285 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SHMT2-214ENST00000554604 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 MAGEL2Q9UJ55 1249 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 EML6Q6ZMW3 1958 aa11.56□□□□□ -0.56
SHMT2-214ENST00000554604 NOTCH2Q04721 2471 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CACNA1DQ01668 2161 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 A0A096LPI6 279 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 TRBV5-3A0A0A0MS03 114 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 TRBV11-1A0A0K0K1C0 115 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 TCRBV5S2A0A599 114 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 H0YJX3 145 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 SAP18O00422 153 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 RTCAO00442 366 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CYR61O00622 381 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 HNRNPRO43390 633 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CTNSO60931 367 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 UQCRBP14927 111 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PRPS1L1P21108 318 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 HIST1H1TP22492 207 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 ATP5A1P25705 553 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 HSPA13P48723 471 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CYB561P49447 251 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 AQP4P55087 323 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PER3P56645 1201 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 MRPS35P82673 323 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PMP22Q01453 160 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 MTX3Q5HYI7 312 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 KHDRBS2Q5VWX1 349 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 ZNF324BQ6AW86 544 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 SPINK14Q6IE38 97 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 GFRALQ6UXV0 394 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 KRTCAP2Q8N6L1 136 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 FAM98AQ8NCA5 519 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 MDS2Q8NDY4 140 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 TMEM52Q8NDY8 209 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 NFAM1Q8NET5 270 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 TNIP2Q8NFZ5 429 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 THAP3Q8WTV1 239 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 RGMAQ96B86 450 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 C11orf24Q96F05 449 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 ITCHQ96J02 903 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CSF3RQ99062 836 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 MTERF1Q99551 399 aaKnown RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 VCXQ9H320 206 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 OR51B5Q9H339 312 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 ADAP2Q9NPF8 381 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 LRFN1Q9P244 771 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PLEKHB1Q9UF11 243 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-214ENST00000554604 EGFL7Q9UHF1 273 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 PCDHGB6Q9Y5F9 930 aa11.55□□□□□ -0.56
SHMT2-214ENST00000554604 CLCA3PQ9Y6N3 262 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms