RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZNF500O60304 480 aaPredicted RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 PLOD3O60568 738 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 TRIM13O60858 407 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 WDR1O75083 606 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ABCB1P08183 1280 aaPredicted RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CELA3AP09093 270 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 IFI6P09912 130 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 RFPL3SP0C7P2 107 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 NEFHP12036 1026 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 COX6B1P14854 86 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 PCSK2P16519 638 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ACVR2AP27037 513 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CHRNB4P30926 498 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 MPIP34949 423 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CASP3P42574 277 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 IFFO1Q0D2I5 559 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 SNTA1Q13424 505 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 EXOSC7Q15024 291 aaKnown RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 LTB4RQ15722 352 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 GXYLT1Q4G148 440 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 TRMT12Q53H54 448 aaKnown RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 WLSQ5T9L3 541 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 TMEM64Q6YI46 380 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 NCCRP1Q6ZVX7 275 aaPredicted RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 NUP54Q7Z3B4 507 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 C10orf107Q8IVU9 208 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 FAM9CQ8IZT9 166 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 BANPQ8N9N5 519 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ACBD4Q8NC06 268 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ADCY4Q8NFM4 1077 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 OR52R1Q8NGF1 315 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 OR5M3Q8NGP4 307 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 NEIL3Q8TAT5 605 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CA5BP1Q8WTZ4 195 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 RND1Q92730 232 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CAVIN3Q969G5 261 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 EXOSC8Q96B26 276 aaKnown RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 SDCCAG3Q96C92 435 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 ZNF764Q96H86 408 aaPredicted RBP9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 POM121Q96HA1 1249 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 TMEM41AQ96HV5 264 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 RILPQ96NA2 401 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 BTBD9Q96Q07 612 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 EBPLQ9BY08 206 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 LDAHQ9H6V9 325 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 MIEF1Q9NQG6 463 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 PFDN4Q9NQP4 134 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 PNPLA3Q9NST1 481 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 CCL27Q9Y4X3 112 aa9.54□□□□□ -0.88
PTCD2P1-201ENST00000554393 A0A087WV62 115 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 TLDC2A0PJX2 215 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 OR6C70A6NIJ9 312 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 MYO1GB0I1T2 1018 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 FAM47E-STBD1D6RA91 191 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SLC28A1O00337 649 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 AZIN1O14977 448 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 RGS14O43566 566 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 NPHS1O60500 1241 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SLU7O95391 586 aaKnown RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 CHEK2O96017 543 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 GABRA1P14867 456 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 GDF1P27539 372 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 MRPS35P82673 323 aaKnown RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 BTKQ06187 659 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 C2orf80Q0P641 193 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 PLCXD2Q0VAA5 305 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 KIAA0040Q15053 153 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 CDSNQ15517 529 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 FAM71E1Q6IPT2 247 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 NOXRED1Q6NXP6 359 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SLC30A6Q6NXT4 461 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 FAM180BQ6P0A1 224 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SCIMPQ6UWF3 145 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 B3GNT6Q6ZMB0 384 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SIMC1Q8NDZ2 872 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 OR9A2Q8NGT5 310 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 OR2W6PQ8NHA6 318 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 LILRB4Q8NHJ6 448 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 HGDQ93099 445 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 OMA1Q96E52 524 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 FCRL1Q96LA6 429 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 VSTM2LQ96N03 204 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 TMEM109Q9BVC6 243 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 GATA5Q9BWX5 397 aaPredicted RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 UBQLN3Q9H347 655 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 C12orf65Q9H3J6 166 aaKnown RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 EXO5Q9H790 373 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 METTL7AQ9H8H3 244 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 TNFRSF12AQ9NP84 129 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 GPR55Q9Y2T6 319 aaPredicted RBP9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 C15orf41Q9Y2V0 281 aa9.53□□□□□ -0.88
PTCD2P1-201ENST00000554393 COQ9O75208 318 aa9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
PTCD2P1-201ENST00000554393 LRATO95237 230 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms