RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 ERP27Q96DN0 273 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 DTNBP1Q96EV8 351 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 ZNF681Q96N22 645 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 EPB41L4BQ9H329 900 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 GALNT9Q9HCQ5 603 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 STK38LQ9Y2H1 464 aa17.11■□□□□ 0.33
CPSF2-203ENST00000554290 GNG14A0A1W2PPG7 69 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 FAM221AA4D161 298 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 C2orf72A6NCS6 295 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 PRAMEF25A6NGN4 478 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 TO15178 435 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ABCB7O75027 752 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 UGT2B11O75310 529 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 REM1O75628 298 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 CYP4B1P13584 511 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 CPN1P15169 458 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 PCSK2P16519 638 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ECHS1P30084 290 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 MRPS35P82673 323 aaKnown RBP17.1■□□□□ 0.33
CPSF2-203ENST00000554290 DUSP2Q05923 314 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 UNC50Q53HI1 259 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 DESI1Q6ICB0 168 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 FAM180BQ6P0A1 224 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ENPP6Q6UWR7 440 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 SIMC1Q8NDZ2 872 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 CHDHQ8NE62 594 aaPredicted RBP17.1■□□□□ 0.33
CPSF2-203ENST00000554290 OR14L1PQ8NHC6 308 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ZNF675Q8TD23 568 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 RMND5BQ96G75 393 aaPredicted RBP17.1■□□□□ 0.33
CPSF2-203ENST00000554290 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ZNF382Q96SR6 550 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 FOXC2Q99958 501 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 SERHLQ9NQF3 203 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 EHD3Q9NZN3 535 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 TMEM216Q9P0N5 145 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 ST6GALNAC2Q9UJ37 374 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 NFU1Q9UMS0 254 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 MAPRE3Q9UPY8 281 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 DLGAP4Q9Y2H0 992 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 GPR55Q9Y2T6 319 aaPredicted RBP17.1■□□□□ 0.33
CPSF2-203ENST00000554290 SPG11Q96JI7 2443 aa17.1■□□□□ 0.33
CPSF2-203ENST00000554290 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 OR6C70A6NIJ9 312 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 A6NNC1 897 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 PCDH7O60245 1069 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 DLX3O60479 287 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 IL18BPO95998 194 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 IMPDH1P20839 514 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 ATP5F1P24539 256 aaPredicted RBP17.09■□□□□ 0.33
CPSF2-203ENST00000554290 SOX18P35713 384 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 KRT20P35900 424 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 PTGDSP41222 190 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 PSPHP78330 225 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 ACSM2AQ08AH3 577 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 HEPACAMQ14CZ8 416 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 DAZAP2Q15038 168 aaPredicted RBP17.09■□□□□ 0.33
CPSF2-203ENST00000554290 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 SPIN4Q56A73 249 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 TCHHL1Q5QJ38 904 aaPredicted RBP17.09■□□□□ 0.33
CPSF2-203ENST00000554290 DCST1Q5T197 706 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 ACSM2BQ68CK6 577 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 CCDC116Q8IYX3 515 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 TMBIM1Q969X1 311 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 CCM2LQ9NUG4 571 aaPredicted RBP17.09■□□□□ 0.33
CPSF2-203ENST00000554290 GIMAP4Q9NUV9 329 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 HEY2Q9UBP5 337 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 ARHGAP21Q5T5U3 1957 aa17.09■□□□□ 0.33
CPSF2-203ENST00000554290 TUBAL3A6NHL2 446 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 EEF1E1-BLOC1S5C9J1V9 151 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 EEF1E1O43324 174 aaKnown RBP17.08■□□□□ 0.32
CPSF2-203ENST00000554290 IL3P08700 152 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 ABHD2P08910 425 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 DNASE1P24855 282 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 DGKQP52824 942 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 PKNOX1P55347 436 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 ZNF628Q5EBL2 1059 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 FBXW10Q5XX13 1052 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 TRMT10CQ7L0Y3 403 aaKnown RBP17.08■□□□□ 0.32
CPSF2-203ENST00000554290 TRIM42Q8IWZ5 723 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 WDSUB1Q8N9V3 476 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 EXOSC8Q96B26 276 aaKnown RBP17.08■□□□□ 0.32
CPSF2-203ENST00000554290 SLC35A4Q96G79 324 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 ZFP3Q96NJ6 502 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 BTBD9Q96Q07 612 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 TMEM237Q96Q45 408 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 TM9SF2Q99805 663 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 ACPTQ9BZG2 426 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 OR2B2Q9GZK3 357 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 CXXC4Q9H2H0 198 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 AKAP9Q99996 3911 aa17.08■□□□□ 0.32
CPSF2-203ENST00000554290 H0Y3Z8 333 aa17.07■□□□□ 0.32
CPSF2-203ENST00000554290 ENO1P06733 434 aaKnown RBP17.07■□□□□ 0.32
CPSF2-203ENST00000554290 TMIGD3P0DMS9 266 aaPredicted RBP17.07■□□□□ 0.32
CPSF2-203ENST00000554290 EPXP11678 715 aa17.07■□□□□ 0.32
CPSF2-203ENST00000554290 CD99P14209 185 aa17.07■□□□□ 0.32
CPSF2-203ENST00000554290 CHN1P15882 459 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms