RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 VPS4AQ9UN37 437 aa17.04■□□□□ 0.32
PSEN1-210ENST00000554131 NDUFAF1Q9Y375 327 aa17.04■□□□□ 0.32
PSEN1-210ENST00000554131 PCDHB14Q9Y5E9 798 aa17.04■□□□□ 0.32
PSEN1-210ENST00000554131 EPG5Q9HCE0 2579 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 FRG2CA6NGY1 282 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 TO15178 435 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ITGA10O75578 1167 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 DCTN3O75935 186 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 TRHRP34981 398 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 SOAT1P35610 550 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ST13P50502 369 aaKnown RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 PRKAG1P54619 331 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 DCAF7P61962 342 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ZNF155Q12901 538 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 KCNAB2Q13303 367 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 COQ5Q5HYK3 327 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 C6orf10Q5SRN2 563 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 IRAK1BP1Q5VVH5 260 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 REP15Q6BDI9 236 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ZNF621Q6ZSS3 439 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 ZNF227Q86WZ6 799 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 FITM2Q8N6M3 262 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 POU5F2Q8N7G0 328 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 SLC16A11Q8NCK7 471 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 RP9Q8TA86 221 aaKnown RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 MIPOL1Q8TD10 442 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 LCORQ96JN0 433 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 LMF1Q96S06 567 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 TRIM45Q9H8W5 580 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 EQTNQ9NQ60 294 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 VAPAQ9P0L0 249 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 TUBD1Q9UJT1 453 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 YARS2Q9Y2Z4 477 aaKnown RBP17.03■□□□□ 0.32
PSEN1-210ENST00000554131 GMEB1Q9Y692 573 aa17.03■□□□□ 0.32
PSEN1-210ENST00000554131 LOC100653049A0A140TA62 436 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 MKRN2OSH3BPM6 223 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 FXYD1O00168 92 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 ANGPT2O15123 496 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 KRT34O76011 436 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 NKX2-2O95096 273 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 COX4I1P13073 169 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 CD97P48960 835 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 NR0B1P51843 470 aaKnown RBP17.02■□□□□ 0.32
PSEN1-210ENST00000554131 TP53BP2Q13625 1128 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 CYLC2Q14093 348 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-210ENST00000554131 LASP1Q14847 261 aaKnown RBP17.02■□□□□ 0.32
PSEN1-210ENST00000554131 MAPRE2Q15555 327 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 NNATQ16517 81 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 SPDYE7PQ495Y7 208 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 ZCCHC12Q6PEW1 402 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 IGFL3Q6UXB1 125 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 LINC00696Q6ZRV3 163 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 CDRT4Q8N9R6 151 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 AURKBQ96GD4 344 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-210ENST00000554131 LRRC37BQ96QE4 947 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 RNF32Q9H0A6 362 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 ADNPQ9H2P0 1102 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 STMN3Q9NZ72 180 aa17.02■□□□□ 0.32
PSEN1-210ENST00000554131 SPENQ96T58 3664 aaKnown RBP17.01■□□□□ 0.31
PSEN1-210ENST00000554131 BBIP1A8MTZ0 92 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 ERVH48-1M5A8F1 160 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 WDPCPO95876 746 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 PRDX6P30041 224 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 SOX3P41225 446 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 RPS26P62854 115 aaKnown RBP17.01■□□□□ 0.31
PSEN1-210ENST00000554131 DUSP5Q16690 384 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 ABHD17BQ5VST6 288 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 CDC73Q6P1J9 531 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 SZRD1Q7Z422 152 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 SLC15A4Q8N697 577 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 OR4N2Q8NGD1 307 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 FBXO30Q8TB52 745 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 HSPBAP1Q96EW2 488 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 OTUB1Q96FW1 271 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-210ENST00000554131 YIPF4Q9BSR8 244 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 ACTRT3Q9BYD9 372 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 GIN1Q9NXP7 522 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 PLA2G3Q9NZ20 509 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 TEKT2Q9UIF3 430 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 TP53TG5Q9Y2B4 290 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 PCDHGB7Q9Y5F8 929 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 CSAG2Q9Y5P2 127 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 KCNE3Q9Y6H6 103 aa17.01■□□□□ 0.31
PSEN1-210ENST00000554131 TTC36A6NLP5 189 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 CDK2AP1O14519 115 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 ACOX3O15254 700 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 OR6B1O95007 311 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 UNC5CO95185 931 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 KCNH1O95259 989 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 FBXO45P0C2W1 286 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 ABCD3P28288 659 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 PRIM2P49643 509 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 SSR4P51571 173 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 TUBA3CQ13748 450 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 ZNF791Q3KP31 576 aaPredicted RBP17■□□□□ 0.31
PSEN1-210ENST00000554131 COX20Q5RI15 118 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 HLA-DQA1Q5Y7H0 255 aa17■□□□□ 0.31
PSEN1-210ENST00000554131 TUBA3EQ6PEY2 450 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms