RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 BCL2A1Q16548 175 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PGGHGQ32M88 737 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 EIPR1Q53HC9 387 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 NCMAPQ5T1S8 102 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CDKAL1Q5VV42 579 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CASC4Q6P4E1 433 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PLXDC2Q6UX71 529 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 DEF8Q6ZN54 512 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 KIAA1328Q86T90 577 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 C17orf64Q86WR6 236 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 TAGAPQ8N103 731 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CDYL2Q8N8U2 506 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SNX31Q8N9S9 440 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF740Q8NDX6 193 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 STEAP2Q8NFT2 490 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 OR1J4Q8NGS1 313 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 OR4L1Q8NH43 312 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 LILRB1Q8NHL6 650 aaPredicted RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF480Q8WV37 535 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 HSD17B8Q92506 261 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ANKRD7Q92527 254 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 UBE2FQ969M7 185 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SLC35A4Q96G79 324 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 RBM18Q96H35 190 aaKnown RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 MAP6Q96JE9 813 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 RADILQ96JH8 1075 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 NPLQ9BXD5 320 aaPredicted RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ALOXE3Q9BYJ1 711 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 OPN3Q9H1Y3 402 aaPredicted RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 GBA3Q9H227 469 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 MANSC1Q9H8J5 431 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CNTD2Q9H8S5 307 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PROK2Q9HC23 129 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 EIF2B3Q9NR50 452 aaKnown RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PLSCR4Q9NRQ2 329 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 HOMER3Q9NSC5 361 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ARL15Q9NXU5 204 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 WWOXQ9NZC7 414 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 FBLN5Q9UBX5 448 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SLC13A4Q9UKG4 626 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PTGDR2Q9Y5Y4 395 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 BZW2Q9Y6E2 419 aaKnown RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PMF1-BGLAPU3KQ54 211 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SNRNP200O75643 2136 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 IQANK1A0A1B0GTG1 560 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 A0A1W2PPL8 197 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CCDC162PA2VCL2 907 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 MROH6A6NGR9 719 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 SLC22A20A6NK97 555 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 C17orf105B2RV13 164 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 H3BMM5 538 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PLOD2O00469 737 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 SMAD9O15198 467 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 NDUFS4O43181 175 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CST8O60676 142 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PSIP1O75475 530 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 NDUFS3O75489 264 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF189O75820 626 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 SLC16A8O95907 504 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 SYF2O95926 243 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CGAP01215 116 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF10P21506 573 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 FUT4P22083 530 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PDLIM4P50479 330 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 EFNA4P52798 201 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 TAS2R40P59535 323 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 CHRNB3Q05901 458 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 GGTLC2Q14390 218 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 KRT31Q15323 416 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PFKFB4Q16877 469 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 EXOC3L2Q2M3D2 409 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 KBTBD12Q3ZCT8 623 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PRAMEF9Q5VWM5 478 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 TIGD3Q6B0B8 471 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 FAM180BQ6P0A1 224 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 AFTPHQ6ULP2 937 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 SSX8Q7RTT4 187 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF571Q7Z3V5 609 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 TBC1D1Q86TI0 1168 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 LINC00523Q86TU6 105 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 YRDCQ86U90 279 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 DTX2Q86UW9 622 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 STK32CQ86UX6 486 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 KRT222Q8N1A0 295 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 GLB1L3Q8NCI6 653 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 TRPV3Q8NET8 790 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 RAB3IL1Q8TBN0 382 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 UTP15Q8TED0 518 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PTPMT1Q8WUK0 201 aaPredicted RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 KCTD4Q8WVF5 259 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ATL1Q8WXF7 558 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 HDAC2Q92769 488 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 NMD3Q96D46 503 aaKnown RBP4.63□□□□□ -1.67
CKAP4-203ENST00000553039 MRGPRX4Q96LA9 322 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 RUNDC3BQ96NL0 473 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ERGIC2Q96RQ1 377 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 PIMREGQ9BSJ6 248 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 ADI1Q9BV57 179 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 UBQLN3Q9H347 655 aa4.63□□□□□ -1.67
CKAP4-203ENST00000553039 KCNF1Q9H3M0 494 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms