RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SENP1Q9P0U3 644 aa10.29□□□□□ -0.76
SUPT16H-202ENST00000552829 CDC42EP3Q9UKI2 254 aa10.29□□□□□ -0.76
SUPT16H-202ENST00000552829 DTX4Q9Y2E6 619 aa10.29□□□□□ -0.76
SUPT16H-202ENST00000552829 TENM1Q9UKZ4 2725 aa10.29□□□□□ -0.76
SUPT16H-202ENST00000552829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 C16orf97H3BN30 126 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PLOD2O00469 737 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 HS3ST1O14792 307 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PRAMEF4O60810 478 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 H2AFYO75367 372 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 SCELO95171 688 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 GUCA1CO95843 209 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 KRT4P19013 534 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 ATP5A1P25705 553 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 CNTFP26441 200 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 IDUAP35475 653 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 KIR2DL2P43627 348 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 SERPINB8P50452 374 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 LHX2P50458 406 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PGGT1BP53609 377 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 IL2P60568 153 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 BIKQ13323 160 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 SLBPQ14493 270 aaKnown RBP eCLIP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 BEX5Q5H9J7 111 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PRAMEF9Q5VWM5 478 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 SCIMPQ6UWF3 145 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 SLC29A4Q7RTT9 530 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 CNTN4Q8IWV2 1026 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 OR4N5Q8IXE1 308 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 C2CD4AQ8NCU7 369 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 ROBO4Q8WZ75 1007 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 CCT6BQ92526 530 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 TP53INP1Q96A56 240 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PPWD1Q96BP3 646 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 MTBPQ96DY7 904 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PDLIM5Q96HC4 596 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 APOPT1Q96IL0 206 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 DGAT2Q96PD7 388 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 FAM111AQ96PZ2 611 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 F2RL3Q96RI0 385 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 PAIP2Q9BPZ3 127 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 CAPS2Q9BXY5 557 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 AMBRA1Q9C0C7 1298 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 OR2B2Q9GZK3 357 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 RABEP2Q9H5N1 569 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 CNOT10Q9H9A5 744 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 TMEM160Q9NX00 188 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 TEX10Q9NXF1 929 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 NKIRAS1Q9NYS0 192 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 ZNF490Q9ULM2 529 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 RNF112Q9ULX5 631 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 ACTL7BQ9Y614 415 aa10.28□□□□□ -0.76
SUPT16H-202ENST00000552829 A0A096LNT2 108 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 FAM95CA0A1B0GW59 222 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 OR6C76A6NM76 312 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 CAPN14A8MX76 684 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 H0Y3Z8 333 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 COPEO14579 308 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 AHSGP02765 367 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 GNAZP19086 355 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 MDH1P40925 334 aaKnown RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 MASP1P48740 699 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 GFRA1P56159 465 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 CLDN18P56856 261 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 HERVK_113P63132 956 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ERVK-8P63133 956 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 MPP2Q14168 576 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ZNF460Q14592 562 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SPRED3Q2MJR0 410 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ADNP2Q6IQ32 1131 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 TMEM81Q6P7N7 255 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ENPP6Q6UWR7 440 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 RNF111Q6ZNA4 994 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ZC3HC1Q86WB0 502 aaKnown RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 TRIM42Q8IWZ5 723 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 TAGAPQ8N103 731 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ACOT4Q8N9L9 421 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 BANPQ8N9N5 519 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 DOK4Q8TEW6 326 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 DYDC1Q8WWB3 177 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 RBM18Q96H35 190 aaKnown RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ZC3HAV1LQ96H79 300 aaKnown RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 GAL3ST4Q96RP7 486 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SLC39A3Q9BRY0 314 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ERVK-6Q9BXR3 956 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 OPN3Q9H1Y3 402 aaPredicted RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 VPS11Q9H270 941 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SLCO5A1Q9H2Y9 848 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 RHOJQ9H4E5 214 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 COPS7BQ9H9Q2 264 aaPredicted RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SNX15Q9NRS6 342 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 INTS9Q9NV88 658 aaKnown RBP10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SLC17A7Q9P2U7 560 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 ERVK-19Q9WJR5 959 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 DLGAP4Q9Y2H0 992 aa10.27□□□□□ -0.77
SUPT16H-202ENST00000552829 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
SUPT16H-202ENST00000552829 PCNX3Q9H6A9 2034 aa10.26□□□□□ -0.77
SUPT16H-202ENST00000552829 ANKDD1BA6NHY2 528 aa10.26□□□□□ -0.77
SUPT16H-202ENST00000552829 GNB5O14775 395 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms