RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CHDHQ8NE62 594 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OR52B6Q8NGF0 335 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OR8K3Q8NH51 312 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 GABPB2Q8TAK5 448 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 NUBPLQ8TB37 319 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 SPPL2AQ8TCT8 520 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ABTB1Q969K4 478 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ADIPOR1Q96A54 375 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 PHF21BQ96EK2 531 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF597Q96LX8 424 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 FANCD2OSQ96PS1 177 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 YIPF4Q9BSR8 244 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 RBM24Q9BX46 236 aaKnown RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ITPAQ9BY32 194 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 BRINP2Q9C0B6 783 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OPN3Q9H1Y3 402 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 OR10A5Q9H207 317 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 UBQLN3Q9H347 655 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ACTR8Q9H981 624 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CNOT10Q9H9A5 744 aaKnown RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 KLHL28Q9NXS3 571 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 FLRT3Q9NZU0 649 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HEY2Q9UBP5 337 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 BCAP29Q9UHQ4 241 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 FBXL2Q9UKC9 423 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CORO1CQ9ULV4 474 aaPredicted RBP6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 HIF3AQ9Y2N7 669 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 C15orf41Q9Y2V0 281 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ANGPTL3Q9Y5C1 460 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 NPFFR2Q9Y5X5 522 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 MED12LQ86YW9 2145 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
PRPF40B-214ENST00000551320 CUBNO60494 3623 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 H0Y3Z8 333 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ICOSLGO75144 302 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 UGT2B11O75310 529 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ERAL1O75616 437 aaKnown RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 SCELO95171 688 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 NTN1O95631 604 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 HRGP04196 525 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 INHBBP09529 407 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 TMIGD3P0DMS9 266 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GFAPP14136 432 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CPMP14384 443 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GABRA1P14867 456 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GPX3P22352 226 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CTSSP25774 331 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ABCD3P28288 659 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 PTPN6P29350 595 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 SERPINB3P29508 390 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GP5P40197 560 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CPA2P48052 419 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ALDH9A1P49189 494 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 PLTPP55058 493 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CORO7P57737 925 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 DCAF7P61962 342 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 NKX6-1P78426 367 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 MGAT2Q10469 447 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 LAPTM5Q13571 262 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GTF2H2Q13888 395 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 RPS6KA2Q15349 733 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ZKSCAN8Q15776 578 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 TBCCQ15814 346 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 PRSS53Q2L4Q9 553 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 TMEM35AQ53FP2 167 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 PAGE2BQ5JRK9 111 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 HLA-DQA1Q5Y7H0 255 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 NSUN5P2Q63ZY6 315 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GTF2H2CQ6P1K8 395 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 VWA1Q6PCB0 445 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 SCIMPQ6UWF3 145 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 LRRC70Q7Z2Q7 622 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 GALNT10Q86SR1 603 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CXorf67Q86X51 503 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ST13P4Q8IZP2 240 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 TMEM151AQ8N4L1 468 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 WDSUB1Q8N9V3 476 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 MYRIPQ8NFW9 859 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 OR4N2Q8NGD1 307 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 UHMK1Q8TAS1 419 aaKnown RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 FAM222BQ8WU58 562 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ANKRD7Q92527 254 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 KAT2AQ92830 837 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 TANKQ92844 425 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 LRRC39Q96DD0 335 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 PERPQ96FX8 193 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 FAM46AQ96IP4 442 aaKnown RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ALPK1Q96QP1 1244 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 CPNE1Q99829 537 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ANGPTL4Q9BY76 406 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 RTN4RQ9BZR6 473 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 NOL11Q9H8H0 719 aaKnown RBP6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 METTL7AQ9H8H3 244 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 IPPKQ9H8X2 491 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 UBTD1Q9HAC8 227 aa6.21□□□□□ -1.42
PRPF40B-214ENST00000551320 ACKR4Q9NPB9 350 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms