RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 C17orf105B2RV13 164 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 C9JVG2 144 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ANKRD28O15084 1053 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 UBDO15205 165 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 TBX19O60806 448 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SHOX2O60902 331 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DNAJB5O75953 348 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ATP1B1P05026 303 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SLC35E2P0CK97 266 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 PORP16435 677 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CSNK2A2P19784 350 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DRD4P21917 467 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CFPP27918 469 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 PTGER1P34995 402 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 FEN1P39748 380 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 MRPL19P49406 292 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 XKP51811 444 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 PGDP52209 483 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SEC24CP53992 1094 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 NME5P56597 212 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CLDN8P56748 225 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SLC26A5P58743 744 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ERVFRD-1P60508 538 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 AP2B1P63010 937 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DUSP2Q05923 314 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 AIMP2Q13155 320 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SQLEQ14534 574 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 LTB4RQ15722 352 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CEBPEQ15744 281 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 EXT1Q16394 746 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 GSTA3Q16772 222 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DPY19L1Q2PZI1 675 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DEFB109BQ30KR1 87 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 BTBD16Q32M84 506 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF750Q32MQ0 723 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 FAM174BQ3ZCQ3 159 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 PDCD4Q53EL6 469 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 PLAG1Q6DJT9 500 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 FAM180BQ6P0A1 224 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 NDUFAF7Q7L592 441 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SPATA21Q7Z572 469 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CAMKMTQ7Z624 323 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 C1QL4Q86Z23 238 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 RIMKLAQ8IXN7 391 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 MIER2Q8N344 545 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 C7orf57Q8NEG2 295 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 OR7A2PQ8NGA2 310 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 OR9A2Q8NGT5 310 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZFP28Q8NHY6 868 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SUN3Q8TAQ9 357 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SLC2A12Q8TD20 617 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 C10orf82Q8WW14 230 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DAZLQ92904 295 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CIDECQ96AQ7 238 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 TESCQ96BS2 214 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZBED6CLQ96FA7 236 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 FBXL20Q96IG2 436 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 FER1L6-AS2Q96M78 137 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF681Q96N22 645 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 RILPQ96NA2 401 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 BBS4Q96RK4 519 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZBTB18Q99592 522 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CNPPD1Q9BV87 410 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ALOXE3Q9BYJ1 711 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 DPY30Q9C005 99 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 OR8D2Q9GZM6 311 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CLMPQ9H6B4 373 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 KCNK13Q9HB14 408 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SLAMF7Q9NQ25 335 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SDR39U1Q9NRG7 319 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ATAD3AQ9NVI7 634 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 TAS2R7Q9NYW3 318 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 SH3BP4Q9P0V3 963 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 COPS7AQ9UBW8 275 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 ATP6V1HQ9UI12 483 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 G3BP2Q9UN86 482 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 MAPRE3Q9UPY8 281 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 GPR45Q9Y5Y3 372 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 COPG1Q9Y678 874 aaKnown RBP5.89□□□□□ -1.47
PRKDC-211ENST00000546304 CLCA3PQ9Y6N3 262 aa5.89□□□□□ -1.47
PRKDC-211ENST00000546304 TRBV11-1A0A0K0K1C0 115 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 GMNCA6NCL1 334 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MYO1GB0I1T2 1018 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MASP2O00187 686 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 DDAH2O95865 285 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 IGKV3-11P04433 115 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 SERPINA7P05543 415 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 CELA2AP08217 269 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 LAMP1P11279 417 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 EFNA1P20827 205 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 NT5EP21589 574 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 GALNSP34059 522 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 MC3RP41968 323 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 FRKP42685 505 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ATP4BP51164 291 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 NCBP2P52298 156 aaKnown RBP eCLIP5.88□□□□□ -1.47
PRKDC-211ENST00000546304 ARFIP2P53365 341 aa5.88□□□□□ -1.47
PRKDC-211ENST00000546304 UFM1P61960 85 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms