RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 B3GNT4Q9C0J1 378 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 NTN4Q9HB63 628 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CPNE7Q9UBL6 633 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHB14Q9Y5E9 798 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZCWPW2A0A1B0GU75 182 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 HOXC11O43248 304 aaPredicted RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 DLX3O60479 287 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 H1F0P07305 194 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 YES1P07947 543 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ACPPP15309 386 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GDF1P27539 372 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MECP2P51608 486 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ZXDBP98169 803 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RPA4Q13156 261 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TBRG1Q3YBR2 411 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SHQ1Q6PI26 577 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF534Q76KX8 674 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GALNT10Q86SR1 603 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 PEX13Q92968 403 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MOCOSQ96EN8 888 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MCHR1Q99705 422 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ORAI3Q9BRQ5 295 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RTKNQ9BST9 563 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 COPS4Q9BT78 406 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 POLDIP3Q9BY77 421 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 CD244Q9BZW8 370 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ERVK-18Q9QC07 812 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 CA5BQ9Y2D0 317 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RPH3AQ9Y2J0 694 aaPredicted RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RP1P56715 2156 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 LOC105371267A0A1B0GV96 52 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 A8MT66 165 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SSNA1O43805 119 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SCRG1O75711 98 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 HRGP04196 525 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GNAO1P09471 354 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 PGAM2P15259 253 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 AOC1P19801 751 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ACRV1P26436 265 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 YPEL5P62699 121 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 APOFQ13790 326 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ABRAXAS2Q15018 415 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM35AQ53FP2 167 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 PYDC2Q56P42 97 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 UNC5DQ6UXZ4 953 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RPS27LQ71UM5 84 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 DGLUCYQ7Z3D6 616 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 JAGN1Q8N5M9 183 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 LILRB1Q8NHL6 650 aaPredicted RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ST8SIA2Q92186 375 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ARRDC1-AS1Q9H2J1 176 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MUC13Q9H3R2 512 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SMURF1Q9HCE7 757 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TM7SF3Q9NS93 570 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHGB2Q9Y5G2 931 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 LRRC37A2A6NM11 1700 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 A0A0A6YYC8 382 aaPredicted RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TEX13CA0A0J9YWL9 993 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 A0A0J9YY10 115 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 PRRT4C9JH25 899 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MKRN2OSH3BPM6 223 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 STMND1H3BQB6 276 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 I3L1I5 382 aaPredicted RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TLR4O00206 839 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MPZL2O60487 215 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 ACTL6BO94805 426 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GCH1P30793 250 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SFTPDP35247 375 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GMFBP60983 142 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 NFATC4Q14934 902 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 FAM189A2Q15884 450 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 LINC00696Q6ZRV3 163 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RFLNAQ6ZTI6 216 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MCATQ8IVS2 390 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 KLHDC8AQ8IYD2 350 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 GATAD2BQ8WXI9 593 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 BMFQ96LC9 184 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RBM4BQ9BQ04 359 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 RBM4Q9BWF3 364 aaKnown RBP8.16□□□□□ -1.1
CLIP1-218ENST00000545889 TPT1P8Q9HAU6 139 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 DIABLOQ9NR28 239 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MAN2B2Q9Y2E5 1009 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 SESN1Q9Y6P5 492 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 MYOFQ9NZM1 2061 aa8.16□□□□□ -1.1
CLIP1-218ENST00000545889 FEZF1A0PJY2 475 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 SH3D21A4FU49 640 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.1
CLIP1-218ENST00000545889 C6orf47O95873 294 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 MPC1LP0DKB6 136 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 F3P13726 295 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 BPIP17213 487 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 GADD45AP24522 165 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 IDUAP35475 653 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 XCR1P46094 333 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 KIR2DS3Q14952 304 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 CROCCQ5TZA2 2017 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
CLIP1-218ENST00000545889 OPN5Q6U736 354 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms