RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 DSTNP60981 165 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 EBPQ15125 230 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CYP51A1Q16850 503 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 RABL3Q5HYI8 236 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 GCNT6Q5T4J0 391 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 HLA-DQA1Q5Y7H0 255 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 PGM2L1Q6PCE3 622 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 PTRH1Q86Y79 214 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 ARMC10Q8N2F6 343 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 TMEM102Q8N9M5 508 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 OR2T12Q8NG77 320 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 C16orf52Q8NHV5 167 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 ELP5Q8TE02 316 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 NCLNQ969V3 563 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 HSPBAP1Q96EW2 488 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 AURKBQ96GD4 344 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CADM1Q9BY67 442 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CCDC86Q9H6F5 360 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 Q9N2J8 555 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 A4GALTQ9NPC4 353 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CMTM6Q9NX76 183 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 P4HTMQ9NXG6 502 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 CD300AQ9UGN4 299 aa14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-212ENST00000545856 FRG2CA6NGY1 282 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 TO15178 435 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 STAMBPO95630 424 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 SERPINA7P05543 415 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 HOXB6P17509 224 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 OTX2P32243 289 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 TRHRP34981 398 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 PRKAG1P54619 331 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 LIPEQ05469 1076 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 EEF1A2Q05639 463 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF155Q12901 538 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 TRAP1Q12931 704 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 COL9A2Q14055 689 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 ELOAQ14241 798 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 CYP27C1Q4G0S4 372 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 MTX3Q5HYI7 312 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 FAAH2Q6GMR7 532 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 HEPHL1Q6MZM0 1159 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF771Q7L3S4 317 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 DND1Q8IYX4 353 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 FBXW8Q8N3Y1 598 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC15A4Q8N697 577 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 OR52E4Q8NGH9 312 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 ASB9Q96DX5 294 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF583Q96ND8 569 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 KCTD14Q9BQ13 255 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 THTPAQ9BU02 230 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 IKZF5Q9H5V7 419 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 FOLH1BQ9HBA9 442 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 IL17BQ9UHF5 180 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 MAGEL2Q9UJ55 1249 aa14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 GPR55Q9Y2T6 319 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-212ENST00000545856 C2orf92A0A1B0GVN3 265 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 ELOVL7A1L3X0 281 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 HMGN4O00479 90 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 GMNNO75496 209 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 SEC24DO94855 1032 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 ARAFP10398 606 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 NAGAP17050 411 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 SSTR4P31391 388 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 PCGF2P35227 344 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 GSK3BP49841 420 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 GZMMP51124 257 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 UCNP55089 124 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 SOX8P57073 446 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 RPS18P62269 152 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 MRPS22P82650 360 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 CHAF1BQ13112 559 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 AIMP2Q13155 320 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 IL10RAQ13651 578 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 EXOSC7Q15024 291 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 VMACQ2NL98 169 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 ULK2Q8IYT8 1036 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF441Q8N8Z8 693 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 ZSCAN1Q8NBB4 408 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 CHDHQ8NE62 594 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 OR10A6Q8NH74 314 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 RNF31Q96EP0 1072 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 LCORQ96JN0 433 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 TRNT1Q96Q11 434 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 OR7D2Q96RA2 312 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 CCNL2Q96S94 520 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 G6PC3Q9BUM1 346 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 NUDT9Q9BW91 350 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 BTBD2Q9BX70 525 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 WWTR1Q9GZV5 400 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 OR51I1Q9H343 314 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 HHATLQ9HCP6 504 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 BCL2L10Q9HD36 194 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 EXPH5Q8NEV8 1989 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 DOCK10Q96BY6 2186 aa14.86□□□□□ -0.03
PRPF40A-212ENST00000545856 TMEM8BA6NDV4 472 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PRORSD1PA6NEY8 169 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 A8MUA0 341 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms