RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CERS1P27544 350 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RAB5BP61020 215 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 B4GALNT1Q00973 533 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 DHRS4L2Q6PKH6 230 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ADAMTSL4Q6UY14 1074 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 CALHM3Q86XJ0 350 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ATP6V1C2Q8NEY4 427 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 DNAJA4Q8WW22 397 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 KAT2AQ92830 837 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RBM18Q96H35 190 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 DGAT2Q96PD7 388 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 OR51E2Q9H255 320 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RC3H2Q9HBD1 1191 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 IL21Q9HBE4 155 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 UCKL1Q9NWZ5 548 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 QPCTLQ9NXS2 382 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MED16Q9Y2X0 877 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MED31Q9Y3C7 131 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 MAU2Q9Y6X3 613 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 A0A1W2PQU0 124 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 OR2A25A4D2G3 310 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 B8ZZF3 427 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 M0R3H8 397 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 KLF8O95600 359 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 PAK4O96013 591 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 GASTP01350 101 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 S100GP29377 79 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 EIF2S3P41091 472 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 GBX2P52951 348 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 SLC5A12Q1EHB4 618 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 EOGTQ5NDL2 527 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 SYT6Q5T7P8 510 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 C22orf42Q6IC83 251 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 FAM71E1Q6IPT2 247 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RPL13AP3Q6NVV1 102 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 SLC30A6Q6NXT4 461 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TMEM179BQ7Z7N9 219 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 TOMM5Q8N4H5 51 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 FBXO15Q8NCQ5 510 aaPredicted RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 CHPT1Q8WUD6 406 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 SLC41A3Q96GZ6 507 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 HYLS1Q96M11 299 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PRRC1Q96M27 445 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 FAM83CQ9BQN1 747 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 HDAC8Q9BY41 377 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 RBM38Q9H0Z9 239 aaKnown RBP5.48□□□□□ -1.53
VPS50-220ENST00000544910 MARK1Q9P0L2 795 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 ZNF639Q9UID6 485 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
VPS50-220ENST00000544910 KCNE1BA0A087WTH5 132 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 TRBV4-1A0A0J9YWV2 114 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SERTM1A2A2V5 107 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 C2orf74A8MZ97 194 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CHURC1-FNTBB4DL54 471 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FOSL2P15408 326 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ZNF24P17028 368 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PSMB5P28074 263 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 POLR2IP36954 125 aaKnown RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 PGDP52209 483 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 GP2P55259 537 aaKnown RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 POU6F2P78424 691 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 GAB1Q13480 694 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 RHEBQ15382 184 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 TRAM1Q15629 374 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FAM214AQ32MH5 1076 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 Q6ZNX1 250 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 Q6ZPB1 254 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 IQCF2Q8IXL9 164 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR5D16Q8NGK9 328 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 STOML3Q8TAV4 291 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SERINC2Q96SA4 455 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 VN1R3Q9BXE9 311 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SLC28A3Q9HAS3 691 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 PAQR5Q9NXK6 330 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 CKLFQ9UBR5 152 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR51B4Q9Y5P0 310 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CLEC3AO75596 197 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 RP2O75695 350 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ADORA3P0DMS8 318 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 POLR2CP19387 275 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 ITGA3P26006 1051 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SLC6A6P31641 620 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 SOX3P41225 446 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 HTR2BP41595 481 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 CAMK1Q14012 370 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ALG11Q2TAA5 492 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ANKDD1AQ495B1 522 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FAM76BQ5HYJ3 339 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ADIPOR2Q86V24 386 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 LILRA3Q8N6C8 439 aaPredicted RBP5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR4K5Q8NGD3 323 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 OR9A2Q8NGT5 310 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ADAMTS16Q8TE57 1224 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 WDR92Q96MX6 357 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 AIFM2Q9BRQ8 373 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 FZD3Q9NPG1 666 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 ANKRD28O15084 1053 aa5.47□□□□□ -1.53
VPS50-220ENST00000544910 LILRB3O75022 631 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms