RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CCDC40	Q4G0X9	1142 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	IL23R	Q5VWK5	629 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	NEK5	Q6P3R8	708 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	GPBP1	Q86WP2	473 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	GPD1L	Q8N335	351 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	SPEM1	Q8N4L4	309 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	KLHL30-AS1	Q8NEE0	82 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	DQX1	Q8TE96	717 aa	Known RBP	3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	DLX4	Q92988	240 aa	Predicted RBP	3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	NSMCE2	Q96MF7	247 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	TMEM237	Q96Q45	408 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639	MBD2	Q9UBB5	411 aa		3.18	□□□□□ -1.9
RAP1B-231	ENST00000544639		A0A0J9YVX5	310 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	LRIT2	A6NDA9	550 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TYROBP	O43914	113 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TOX	O94900	526 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	CCDC192	P0DO97	292 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	UMPS	P11172	480 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	PVR	P15151	417 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	PRDX6	P30041	224 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	RAG2	P55895	527 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	PPIA	P62937	165 aa	Known RBP	3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	GAMT	Q14353	236 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	MICA	Q29983	383 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	LRIT3	Q3SXY7	679 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	OR6B2	Q6IFH4	312 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TATDN1	Q6P1N9	297 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	GOLGA7	Q7Z5G4	137 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	FBXL16	Q8N461	479 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	FNDC8	Q8TC99	324 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	ZPLD1	Q8TCW7	415 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	VN1R17P	Q8TDU5	208 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	GTSF1	Q8WW33	167 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	CCDC47	Q96A33	483 aa	Known RBP	3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TSPAN18	Q96SJ8	248 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	NACA2	Q9H009	215 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TNMD	Q9H2S6	317 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	TIGAR	Q9NQ88	270 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	FAM120C	Q9NX05	1096 aa	Known RBP	3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	IMPAD1	Q9NX62	359 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	IL20RA	Q9UHF4	553 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	RSPH14	Q9UHP6	348 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	RNF115	Q9Y4L5	304 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	CROCC	Q5TZA2	2017 aa		3.17	□□□□□ -1.9
RAP1B-231	ENST00000544639	IGLV3-10	A0A075B6K4	115 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	MFSD2B	A6NFX1	497 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	TSC22D2	O75157	780 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PRAMEF12	O95522	483 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	IGSF6	O95976	241 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	RFC2	P35250	354 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PAX2	Q02962	417 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	BNIP1	Q12981	228 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	SLC10A1	Q14973	349 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	ZIC1	Q15915	447 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	UTF1	Q5T230	341 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PRR5L	Q6MZQ0	368 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	CGB2	Q6NT52	195 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PAMR1	Q6UXH9	720 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	GCNT7	Q6ZNI0	430 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	TSEN54	Q7Z6J9	526 aa	Known RBP	3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	ELMOD2	Q8IZ81	293 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	KDM8	Q8N371	416 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	CD177	Q8N6Q3	437 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	OR52J3	Q8NH60	311 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	WDR36	Q8NI36	951 aa	Known RBP	3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	MRAP	Q8TCY5	172 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PPP1R16A	Q96I34	528 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	C9orf85	Q96MD7	179 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	ATG10	Q9H0Y0	220 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	CNOT2	Q9NZN8	540 aa	Known RBP	3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	ABCD2	Q9UBJ2	740 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	SPAST	Q9UBP0	616 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	CLIP2	Q9UDT6	1046 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PRODH2	Q9UF12	536 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	BCAP29	Q9UHQ4	241 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	FZR1	Q9UM11	496 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	PLA2G4C	Q9UP65	541 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	NUDC	Q9Y266	331 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	NTNG1	Q9Y2I2	539 aa		3.16	□□□□□ -1.9
RAP1B-231	ENST00000544639	CCT8L1P	A6NM43	557 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	NPIPA2	E9PIF3	369 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639		H3BMH7	237 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	SDC3	O75056	442 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	GJB5	O95377	273 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	MT-ATP6	P00846	226 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	GIG44	P09565	113 aa	Predicted RBP	3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	LAMP1	P11279	417 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	PRDX2	P32119	198 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	HSPA1L	P34931	641 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	POU3F4	P49335	361 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	ARHGDIB	P52566	201 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	SNX1	Q13596	522 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	EIF2B1	Q14232	305 aa	Known RBP	3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	PARP6	Q2NL67	630 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	LEG1	Q6P5S2	330 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	PAQR9	Q6ZVX9	377 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	ZNF619	Q8N2I2	560 aa		3.15	□□□□□ -1.91
RAP1B-231	ENST00000544639	ARFGAP2	Q8N6H7	521 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms