RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZNF572Q7Z3I7 529 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 P4HA3Q7Z4N8 544 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 C1QL4Q86Z23 238 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 GRAMD2AQ8IUY3 354 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 KLHDC8BQ8IXV7 354 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF595Q8IYB9 648 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 KRT222Q8N1A0 295 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 LRRC17Q8N6Y2 441 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TC2NQ8N9U0 490 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PPFIBP2Q8ND30 876 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FAM156AQ8NDB6 213 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 OR13J1Q8NGT2 312 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 NT5CQ8TCD5 201 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 AKAP1Q92667 903 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 RAB24Q969Q5 203 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SPACA9Q96E40 222 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZC3HAV1LQ96H79 300 aaKnown RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CCDC138Q96M89 665 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PKP4Q99569 1192 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 MACROD1Q9BQ69 325 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 NPLQ9BXD5 320 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 UGT2B28Q9BY64 529 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF696Q9H7X3 374 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SEC61A2Q9H9S3 476 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 MSL2Q9HCI7 577 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TMEM140Q9NV12 185 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FAIMQ9NVQ4 179 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FETUBQ9UGM5 382 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF148Q9UQR1 794 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 LIPT1Q9Y234 373 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SNX8Q9Y5X2 465 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SEC16AO15027 2179 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 IGHV4-30-2A0A087WSY4 118 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 A0A087X0T9 212 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 UQCRHLA0A096LP55 91 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 A0A1W2PP18 115 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 FAM234BA2RU67 622 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ERI2A8K979 691 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 E5RI56 91 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 GFYI3L273 518 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 APOC4-APOC2K7ER74 178 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 EIF3FO00303 357 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PSTPIP1O43586 416 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 OR1F1O43749 312 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SPOPO43791 374 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 KIAA0513O60268 411 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 LCMT2O60294 686 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TRIM3O75382 744 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 NDUFS3O75489 264 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 APOC2P02655 101 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ALDOAP04075 364 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SERPIND1P05546 499 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CSF3P09919 207 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 FAM228BP0C875 321 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 IGHV4-31P0DP07 118 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ENO3P13929 434 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 COX7A2P14406 83 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ALOX15P16050 662 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ITGA2P17301 1181 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TNNI3P19429 210 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 MALP21145 153 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TBXA2RP21731 343 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 IGFBP5P24593 272 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 IMPA1P29218 277 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CCKARP32238 428 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 HPDP32754 393 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PTPN7P35236 360 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 AHRP35869 848 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 COILP38432 576 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CDKN1AP38936 164 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SKIV2L2P42285 1042 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 MSH2P43246 934 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TMED10P49755 219 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CCR8P51685 355 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CTXN1P60606 82 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 RAC3P60763 192 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TBPL1P62380 186 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ACVR1Q04771 509 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ASPHQ12797 758 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CDH17Q12864 832 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SCGB2A2Q13296 93 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SERTAD2Q14140 314 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 EFTUD2Q15029 972 aaKnown RBP eCLIP3.68□□□□□ -1.822e-27■■■■■ 46.3
SNHG1-220ENST00000544550 TOMM20Q15388 145 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PARP6Q2NL67 630 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 KLHL38Q2WGJ6 581 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TSTD2Q5T7W7 516 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PPP4R4Q6NUP7 873 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CASC4Q6P4E1 433 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CLEC17AQ6ZS10 378 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF534Q76KX8 674 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CHMP1BQ7LBR1 199 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF550Q7Z398 422 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CCDC50Q8IVM0 306 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 RHOT2Q8IXI1 618 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms