RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DNTTP04053 509 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CD63P08962 238 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SBK2P0C263 348 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ACSM4P0C7M7 580 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 OR56A5P0C7T3 313 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ARP10275 920 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 DPEP1P16444 411 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 RHCEP18577 417 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 MYL12AP19105 171 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CD72P21854 359 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 PBLDP30039 288 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 RFC3P40938 356 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ACTR1BP42025 376 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 LIG4P49917 911 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CYP2J2P51589 502 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ATXN3P54252 364 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 BTG1P62324 171 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 DSC1Q08554 894 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SLAMF1Q13291 335 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SEMA5AQ13591 1074 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 HNF4GQ14541 408 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SMCO1Q147U7 214 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ZMYND11Q15326 602 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 PPP1R3AQ16821 1122 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SMTNL2Q2TAL5 461 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 TRIM60Q495X7 471 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CRY2Q49AN0 593 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ATP13A5Q4VNC0 1218 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 FAM98BQ52LJ0 330 aaKnown RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 KLHL26Q53HC5 615 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 TFDP3Q5H9I0 405 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 COQ5Q5HYK3 327 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 PDZK1Q5T2W1 519 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NXNL2Q5VZ03 156 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 MZT2BQ6NZ67 158 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SCYL2Q6P3W7 929 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ERICH5Q6P6B1 374 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NOTUMQ6P988 496 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 C11orf88Q6PI97 169 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SUSD1Q6UWL2 747 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF793Q6ZN11 406 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 COLCA1Q6ZS62 124 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 TPGS1Q6ZTW0 290 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SHFQ7M4L6 423 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SSX9Q7RTT3 188 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 PIM3Q86V86 326 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 FAM160B2Q86V87 743 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SLC47A2Q86VL8 602 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SNX29P2Q8IUI4 249 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 FAM217AQ8IXS0 508 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NAGSQ8N159 534 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SVOPLQ8N434 492 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ATPAF2Q8N5M1 289 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 C1orf52Q8N6N3 182 aaKnown RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CHDHQ8NE62 594 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 FAM83FQ8NEG4 500 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 DUSP18Q8NEJ0 188 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ELP4Q96EB1 424 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 LURAP1Q96LR2 239 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CMTM3Q96MX0 182 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SLITRK1Q96PX8 696 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CYP2S1Q96SQ9 504 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 HERPUD2Q9BSE4 406 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 INPP5KQ9BT40 448 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 TRMOQ9BU70 441 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SLC25A23Q9BV35 468 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 C1QTNF1Q9BXJ1 281 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ELOVL6Q9H5J4 265 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 VAT1LQ9HCJ6 419 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 IL1RAPQ9NPH3 570 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 HEYLQ9NQ87 328 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ENTPD7Q9NQZ7 604 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF275Q9NSD4 429 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ANKEF1Q9NU02 776 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 PLCXD1Q9NUJ7 323 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SDHAF2Q9NX18 166 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 RAB20Q9NX57 234 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SCN3BQ9NY72 215 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SPHK1Q9NYA1 384 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 ADA2Q9NZK5 511 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NDUFAF4Q9P032 175 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 MARCOQ9UEW3 520 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 NUFIP1Q9UHK0 495 aaKnown RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 CORO2BQ9UQ03 480 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SAMHD1Q9Y3Z3 626 aaKnown RBP5.5□□□□□ -1.53
XRCC4-206ENST00000542685 SLC22A7Q9Y694 548 aa5.5□□□□□ -1.53
XRCC4-206ENST00000542685 DOCK1Q14185 1865 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC22A23A1A5C7 686 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RHPN2P1A8MT19 583 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PRSS47A8MTI9 375 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 B4DXG7 233 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 H0YCG3 227 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 UBXN8O00124 270 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 AIPO00170 330 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC28A1O00337 649 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RTCAO00442 366 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CASC3O15234 703 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CHADO15335 359 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms