RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SYNGR4O95473 234 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 ERCC1P07992 297 aaPredicted RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 GNAZP19086 355 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 EPHA1P21709 976 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 PTAFRP25105 342 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 BUD31P41223 144 aaPredicted RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 CDH15P55291 814 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 PPA1Q15181 289 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 TSNAXIP1Q2TAA8 658 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 AP5B1Q2VPB7 878 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 RBMS3Q6XE24 437 aaKnown RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 MBOAT1Q6ZNC8 495 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 CPNE9Q8IYJ1 553 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 METTL25Q8N6Q8 603 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 WDSUB1Q8N9V3 476 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 OR4K17Q8NGC6 315 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 OR8K1Q8NGG5 319 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 PPWD1Q96BP3 646 aaKnown RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 FOXN4Q96NZ1 517 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 OR4K3Q96R72 315 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 GPR21Q99679 349 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 CAPS2Q9BXY5 557 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 NT5DC2Q9H857 520 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 UNKLQ9H9P5 680 aaKnown RBP8.41□□□□□ -1.06
YBX3-211ENST00000541351 GALNT9Q9HCQ5 603 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 FBXO34Q9NWN3 711 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 PHF11Q9UIL8 331 aa8.41□□□□□ -1.06
YBX3-211ENST00000541351 ACOX3O15254 700 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 PIN1P1O15428 100 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 RGS9O75916 674 aaPredicted RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 APRTP07741 180 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 DDX5P17844 614 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 TPSB2P20231 275 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 PTNP21246 168 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ZFP36P26651 326 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 CLDN15P56746 228 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 PLCXD2Q0VAA5 305 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ITGADQ13349 1161 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 THOC5Q13769 683 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 IQCB1Q15051 598 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 TCEAL1Q15170 157 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 TPSAB1Q15661 275 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 STX1AQ16623 288 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 TMEM201Q5SNT2 666 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ZNF470Q6ECI4 717 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 Q6ZSR9 355 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 GALNT12Q8IXK2 581 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ZNF619Q8N2I2 560 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 BPIFB2Q8N4F0 458 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 OR7G1Q8NGA0 311 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 CD200R1Q8TD46 325 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 REXO5Q96IC2 774 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 MAPKAP1Q9BPZ7 522 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 CENPKQ9BS16 269 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 TSGA10Q9BZW7 698 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 BPESC1Q9GZL8 116 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 CDC42EP4Q9H3Q1 356 aaKnown RBP8.4□□□□□ -1.06
YBX3-211ENST00000541351 PTGES2Q9H7Z7 377 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 WDR41Q9HAD4 459 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 ETNK1Q9HBU6 452 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 CAPN11Q9UMQ6 739 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 AP4B1Q9Y6B7 739 aa8.4□□□□□ -1.06
YBX3-211ENST00000541351 A0A1B0GTH6 734 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 CCT8L1PA6NM43 557 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 SMTNL1A8MU46 457 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 H3BML4 177 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 HRKO00198 91 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 SCAMP2O15127 329 aaKnown RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 C1GALT1C1LP0DN25 315 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 HIST1H1TP22492 207 aaPredicted RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 NMBRP28336 390 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 GCH1P30793 250 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 SESN2P58004 480 aaPredicted RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 SNRPD2P62316 118 aaKnown RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 PSPHP78330 225 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 MRPS22P82650 360 aaKnown RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 SLMAPQ14BN4 828 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 STK11Q15831 433 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 TMEM35AQ53FP2 167 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 PDSS1Q5T2R2 415 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 BHLHA15Q7RTS1 189 aaPredicted RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
YBX3-211ENST00000541351 OR4N5Q8IXE1 308 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 PRR22Q8IZ63 422 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 SPATA6LQ8N4H0 392 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 ACOT4Q8N9L9 421 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 UBE2FQ969M7 185 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 MTBPQ96DY7 904 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 FAM118BQ9BPY3 351 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 INPP5KQ9BT40 448 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 AICDAQ9GZX7 198 aa8.39□□□□□ -1.07
YBX3-211ENST00000541351 FKRPQ9H9S5 495 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms