RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 C16orf89Q6UX73 402 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 RNF111Q6ZNA4 994 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 GPR155Q7Z3F1 870 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 MRGPREQ86SM8 312 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 RAB43Q86YS6 212 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 C9orf40Q8IXQ3 194 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 SLC15A3Q8IY34 581 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 CPAMD8Q8IZJ3 1885 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 PGAM4Q8N0Y7 254 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 HORMAD2Q8N7B1 307 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 ZNF248Q8NDW4 579 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 C7orf57Q8NEG2 295 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 B3GNT7Q8NFL0 401 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 OR7G1Q8NGA0 311 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 OR56A1Q8NGH5 318 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 OR5D16Q8NGK9 328 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 C16orf52Q8NHV5 167 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 MOAP1Q96BY2 351 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 CLPTM1LQ96KA5 538 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 SLC35G5Q96KT7 338 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 CDRT15Q96T59 188 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 HOPXQ9BPY8 73 aaPredicted RBP8.67□□□□□ -1.02
DDX55-208ENST00000541259 BTBD10Q9BSF8 475 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 THUMPD3Q9BV44 507 aaKnown RBP8.67□□□□□ -1.02
DDX55-208ENST00000541259 SEMA4CQ9C0C4 833 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 C1orf21Q9H246 121 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 OR51I1Q9H343 314 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 PCNX3Q9H6A9 2034 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 LIN28AQ9H9Z2 209 aaKnown RBP8.67□□□□□ -1.02
DDX55-208ENST00000541259 FOLH1BQ9HBA9 442 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 PPIEQ9UNP9 301 aaKnown RBP8.67□□□□□ -1.02
DDX55-208ENST00000541259 HEMK1Q9Y5R4 338 aaPredicted RBP8.67□□□□□ -1.02
DDX55-208ENST00000541259 KCNE3Q9Y6H6 103 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 LAMA5O15230 3695 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 DMXL2Q8TDJ6 3036 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
DDX55-208ENST00000541259 TRBV11-1A0A0K0K1C0 115 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 PRAMEF27A3QJZ7 478 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 SYNDIG1LA6NDD5 238 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 EVPLLA8MZ36 301 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 PCDH17O14917 1159 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 GYG2O15488 501 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 DYRK3O43781 588 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 PRAMEF2O60811 474 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 SORBS2O94875 1100 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 KRT75O95678 551 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 HPP00738 406 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 IFI6P09912 130 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 OR12D1P0DN82 309 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 PRKAR1AP10644 381 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 GPX2P18283 190 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 EIF2S3P41091 472 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 MAP3K8P41279 467 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 CRATP43155 626 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 MAN2A2P49641 1150 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 CORO7P57737 925 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 RNF4P78317 190 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ZNF155Q12901 538 aaPredicted RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 BTBD16Q32M84 506 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 MFSD12Q6NUT3 480 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 C16orf47Q6ZP98 133 aaPredicted RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 OLIG3Q7RTU3 272 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 RNF148Q8N7C7 305 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ZSCAN1Q8NBB4 408 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 SLC16A11Q8NCK7 471 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 OR8J3Q8NGG0 315 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 OR52N2Q8NGI0 321 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 OR10A6Q8NH74 314 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ELP5Q8TE02 316 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 THAP3Q8WTV1 239 aaPredicted RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 RAB8BQ92930 207 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 SLC35A4Q96G79 324 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 VMP1Q96GC9 406 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ART5Q96L15 291 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ZNF583Q96ND8 569 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 MS4A4EQ96PG1 132 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 OR7D2Q96RA2 312 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 EFHD1Q9BUP0 239 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 ITPAQ9BY32 194 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 CADM1Q9BY67 442 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 ACTRT3Q9BYD9 372 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 KAT8Q9H7Z6 458 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDX55-208ENST00000541259 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 TMEM181Q9P2C4 612 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 GMEB1Q9Y692 573 aa8.66□□□□□ -1.02
DDX55-208ENST00000541259 TNRC6AQ8NDV7 1962 aaKnown RBP8.66□□□□□ -1.02
DDX55-208ENST00000541259 GXYLT2A0PJZ3 443 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 TMEM200CA6NKL6 621 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 TAF4O00268 1085 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 HMGN4O00479 90 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 PEX12O00623 359 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 GSC2O15499 205 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 HNRNPCL1O60812 293 aaKnown RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 COQ9O75208 318 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 TNFRSF21O75509 655 aa8.65□□□□□ -1.02
DDX55-208ENST00000541259 BCAS2O75934 225 aaPredicted RBP8.65□□□□□ -1.02
DDX55-208ENST00000541259 CT45A8P0DMV1 189 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms