RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PLCXD2Q0VAA5 305 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 BCL2A1Q16548 175 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 C3orf62Q6ZUJ4 267 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 PAGE2Q7Z2X7 111 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 CMC1Q7Z7K0 106 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 PLCZ1Q86YW0 608 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 GBP7Q8N8V2 638 aaPredicted RBP24.29■■□□□ 1.48
CHFR-218ENST00000540963 ITPAQ9BY32 194 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 GSX2Q9BZM3 304 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 IPPKQ9H8X2 491 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 SAYSD1Q9NPB0 183 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 AHSPQ9NZD4 102 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 ACOT9Q9Y305 439 aa24.29■■□□□ 1.48
CHFR-218ENST00000540963 TNPO3Q9Y5L0 923 aaKnown RBP24.29■■□□□ 1.48
CHFR-218ENST00000540963 TO15178 435 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 UGT2B11O75310 529 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 GUCY1B2O75343 617 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 CD79BP40259 229 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 PPICP45877 212 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 CLDN18P56856 261 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 FAM27E3Q08E93 113 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 GTF2H2Q13888 395 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 GTF2H2CQ6P1K8 395 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 CTAGE3PQ8IX95 158 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 TRPC4APQ8TEL6 797 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 NXNL1Q96CM4 212 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 TMCO6Q96DC7 493 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 ELOVL5Q9NYP7 299 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 MAT2BQ9NZL9 334 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 HEATR5AQ86XA9 2040 aa24.28■■□□□ 1.48
CHFR-218ENST00000540963 C2orf72A6NCS6 295 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 OR6C70A6NIJ9 312 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 SMAD7O15105 426 aaKnown RBP24.27■■□□□ 1.48
CHFR-218ENST00000540963 ABCB7O75027 752 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 GFAPP14136 432 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 NEK2P51955 445 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 HMGCS1Q01581 520 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 MGAT2Q10469 447 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 SLMAPQ14BN4 828 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 NNATQ16517 81 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 PFKFB4Q16877 469 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 DESI1Q6ICB0 168 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 SLC48A1Q6P1K1 146 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 LRRN4CLQ8ND94 238 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 STARD4Q96DR4 205 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 PIK3IP1Q96FE7 263 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 MED18Q9BUE0 208 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 UBTD1Q9HAC8 227 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 KLHL28Q9NXS3 571 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 PRODH2Q9UF12 536 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 BCAP29Q9UHQ4 241 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 RNF11Q9Y3C5 154 aa24.27■■□□□ 1.48
CHFR-218ENST00000540963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.27■■□□□ 1.48
CHFR-218ENST00000540963 C1orf226A1L170 272 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 CLDN9O95484 217 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 TGM6O95932 706 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 CNTFP26441 200 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 STARP49675 285 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 FAM83EQ2M2I3 478 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 PLXDC2Q6UX71 529 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 ZDHHC24Q6UX98 284 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 GOLGA7Q7Z5G4 137 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 PPP1R14CQ8TAE6 165 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 RDH11Q8TC12 318 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 PERPQ96FX8 193 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 SFXN2Q96NB2 322 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 SLC39A3Q9BRY0 314 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 BRINP2Q9C0B6 783 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 CES1P1Q9UKY3 287 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 PCDHA9Q9Y5H5 950 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 WIF1Q9Y5W5 379 aa24.26■■□□□ 1.47
CHFR-218ENST00000540963 A0A087X1B8 175 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 FRG2CA6NGY1 282 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 INAFM1C9JVW0 142 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 SMNDC1O75940 238 aaKnown RBP eCLIP24.25■■□□□ 1.47
CHFR-218ENST00000540963 KLK1P06870 262 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 CSNK2A2P19784 350 aaPredicted RBP24.25■■□□□ 1.47
CHFR-218ENST00000540963 UGT2B10P36537 528 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 PSPHP78330 225 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 CALCOCO2Q13137 446 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 NAB1Q13506 487 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 ACAP2Q15057 778 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 CCNYL2Q5T2Q4 361 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 FAM111BQ6SJ93 734 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 P4HA3Q7Z4N8 544 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 CENPLQ8N0S6 344 aaPredicted RBP24.25■■□□□ 1.47
CHFR-218ENST00000540963 MARK4Q96L34 752 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 COL21A1Q96P44 957 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 FAM111AQ96PZ2 611 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 TRPS1Q9UHF7 1281 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 PSME2Q9UL46 239 aa24.25■■□□□ 1.47
CHFR-218ENST00000540963 ATRQ13535 2644 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 FBN1P35555 2871 aaKnown RBP24.24■■□□□ 1.47
CHFR-218ENST00000540963 TRIM64A6NGJ6 449 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 TRIM64BA6NI03 449 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 TMCC2O75069 709 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 PAX1P15863 534 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 DEKP35659 375 aaKnown RBP24.24■■□□□ 1.47
CHFR-218ENST00000540963 FGFBP1Q14512 234 aa24.24■■□□□ 1.47
CHFR-218ENST00000540963 EXOSC7Q15024 291 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms