RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 HIST1H2AGP0C0S8 130 aaPredicted RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 GHRP10912 638 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 ZNF18P17022 549 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 FCARP24071 287 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 SAA4P35542 130 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 ZNF131P52739 623 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 VCPP55072 806 aaKnown RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 MECOMQ03112 1051 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 KLF5Q13887 457 aaPredicted RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 SLMAPQ14BN4 828 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 PRAMEF8Q5VWM4 474 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 OTPQ5XKR4 325 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 HIST2H2AA3Q6FI13 130 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 CWC27Q6UX04 472 aaKnown RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 B3GLCTQ6Y288 498 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 MOB1BQ7L9L4 216 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 STHQ8IWL8 128 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 LPCAT1Q8NF37 534 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 OR52J3Q8NH60 311 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 HIST1H2ACQ93077 130 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 MRPL53Q96EL3 112 aaKnown RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 EPSTI1Q96J88 318 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 FAM213AQ9BRX8 229 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 TSSK1BQ9BXA7 367 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 CACNG6Q9BXT2 260 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 SLC5A7Q9GZV3 580 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 CENPMQ9NSP4 180 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 ZCCHC3Q9NUD5 404 aaKnown RBP2.34□□□□□ -2.03
MDM2-227ENST00000540709 FLVCR1Q9Y5Y0 555 aa2.34□□□□□ -2.03
MDM2-227ENST00000540709 A0A0A6YYC8 382 aaPredicted RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 A0A0J9YVX5 310 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 RSPH10B2B2RC85 870 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 C11orf98E9PRG8 122 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 I3L1I5 382 aaPredicted RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 ARPC1BO15143 372 aaKnown RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 TYROBPO43914 113 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 REC8O95072 547 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 TGDSO95455 350 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 RSPH10BP0C881 870 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 CT45A10P0DMU9 189 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 GLULP15104 373 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 FUT3P21217 361 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 CTNNA1P35221 906 aaKnown RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 NSFP46459 744 aaKnown RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 SLC26A2P50443 739 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 RAG2P55895 527 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 KIAA1024LP59773 190 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 HERV-K104P63124 156 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 BNIP1Q12981 228 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 MSLNQ13421 630 aaPredicted RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 ZIC1Q15915 447 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 HKDC1Q2TB90 917 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 GLYR1Q49A26 553 aaPredicted RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 AARDQ4LEZ3 155 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 CCDC91Q7Z6B0 441 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 ANKRD23Q86SG2 305 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 C10orf53Q8N6V4 93 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 DHTKD1Q96HY7 919 aaPredicted RBP2.33□□□□□ -2.04
MDM2-227ENST00000540709 OSBPL8Q9BZF1 889 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 TRPV6Q9H1D0 765 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 SNX5Q9Y5X3 404 aa2.33□□□□□ -2.04
MDM2-227ENST00000540709 A0A0U1RQG5 324 aaPredicted RBP2.32□□□□□ -2.04
MDM2-227ENST00000540709 SLC28A1O00337 649 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 SLC7A4O43246 635 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 CA11O75493 328 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 UGT1A3P35503 534 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 ACVR1BP36896 505 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 SMSP52788 366 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 METAP1P53582 386 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 UCP2P55851 309 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 HAND2P61296 217 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 GK2Q14410 553 aaPredicted RBP2.32□□□□□ -2.04
MDM2-227ENST00000540709 HERPUD1Q15011 391 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 EXOSC7Q15024 291 aaKnown RBP2.32□□□□□ -2.04
MDM2-227ENST00000540709 CD226Q15762 336 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 DCAF4L1Q3SXM0 396 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 GPAT3Q53EU6 434 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 IRGCQ6NXR0 463 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 Q6P435 159 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 IYDQ6PHW0 289 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 TMEM179BQ7Z7N9 219 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 PYROXD2Q8N2H3 581 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 OR4A16Q8NH70 328 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 RAB39BQ96DA2 213 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 CPXM1Q96SM3 734 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 TSPY26PQ9H489 355 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 PNPLA3Q9NST1 481 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 COMMD8Q9NX08 183 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 NARFQ9UHQ1 456 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 SYNJ2O15056 1496 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 ARHGAP23Q9P227 1491 aa2.32□□□□□ -2.04
MDM2-227ENST00000540709 PGK1P00558 417 aa2.31□□□□□ -2.04
MDM2-227ENST00000540709 ALOX5P09917 674 aa2.31□□□□□ -2.04
MDM2-227ENST00000540709 UGT1A6P19224 532 aa2.31□□□□□ -2.04
MDM2-227ENST00000540709 MUTP22033 750 aa2.31□□□□□ -2.04
MDM2-227ENST00000540709 OR1D4P47884 311 aa2.31□□□□□ -2.04
MDM2-227ENST00000540709 ALDH3B2P48448 385 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms