RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 CENPFP49454 3210 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 FZD7O75084 574 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PSMD10O75832 226 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PFKMP08237 780 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 AGAP20933 346 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SULT1E1P49888 294 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ADPRHP54922 357 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PRR5P85299 388 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 FOXO1Q12778 655 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MAD2L1Q13257 205 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 UNC50Q53HI1 259 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SLC35D3Q5M8T2 416 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF678Q5SXM1 525 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 H3F3CQ6NXT2 135 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ZFAND4Q86XD8 727 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PRSS35Q8N3Z0 413 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 BOLLQ8N9W6 283 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 OR4Q3Q8NH05 313 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 NETO1Q8TDF5 533 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 NUDT8Q8WV74 236 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 LRFN5Q96NI6 719 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ASB16Q96NS5 453 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PIGQQ9BRB3 760 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ARL6Q9H0F7 186 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SLC25A32Q9H2D1 315 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 BEX1Q9HBH7 125 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SPACA1Q9HBV2 294 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 AGO4Q9HCK5 861 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MID1IP1Q9NPA3 183 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PIPOXQ9P0Z9 390 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 DNAJB11Q9UBS4 358 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 KDM4EB2RXH2 506 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 M0QZ92 97 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ARPC5O15511 151 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 FKTNO75072 461 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SPDEFO95238 335 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ANKRD34CP0C6C1 535 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 OR8G3PP0DMU2 310 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 HIST1H1BP16401 226 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 CYP2F1P24903 491 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MSX1P28360 303 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MPIP34949 423 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MRPL19P49406 292 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 E2F1Q01094 437 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 NHLH2Q02577 135 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PLA2G7Q13093 441 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 NAE1Q13564 534 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 BOP1Q14137 746 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MPPE1Q53F39 396 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PCID2Q5JVF3 399 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 CERCAMQ5T4B2 595 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SPNS3Q6ZMD2 512 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 COMTD1Q86VU5 262 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 FBXO16Q8IX29 292 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 GPD1LQ8N335 351 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 GPR26Q8NDV2 337 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 TMEM185AQ8NFB2 350 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 PROKR1Q8TCW9 393 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF296Q8WUU4 475 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 SENP5Q96HI0 755 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 AMDHD1Q96NU7 426 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 MRPL45Q9BRJ2 306 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 THUMPD3Q9BV44 507 aaKnown RBP8.95□□□□□ -0.98
CLIP1-214ENST00000540539 BRINP2Q9C0B6 783 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 EGLN1Q9GZT9 426 aa8.95□□□□□ -0.98
CLIP1-214ENST00000540539 CASP8AP2Q9UKL3 1982 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 LOXHD1Q8IVV2 1947 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 OR1I1O60431 355 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 GALR3O60755 368 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 GLP2RO95838 553 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 OTCP00480 354 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 IFNA2P01563 188 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SBK2P0C263 348 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 PRR35P0CG20 571 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 NMBRP28336 390 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SFNP31947 248 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 CDKN2CP42773 168 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 FLT3LGP49771 235 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 STK19P49842 368 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SIM1P81133 766 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SEMG2Q02383 582 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 PRKCZQ05513 592 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 ZNF239Q16600 458 aaKnown RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 CCL14Q16627 93 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 ZSWIM7Q19AV6 140 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 NCMAPQ5T1S8 102 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 PLAG1Q6DJT9 500 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 FBXO46Q6PJ61 603 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-214ENST00000540539 DEF8Q6ZN54 512 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 MSANTD1Q6ZTZ1 278 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 SPATA19Q7Z5L4 167 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 FAM126BQ8IXS8 530 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 TMEM203Q969S6 136 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 C12orf66Q96MD2 445 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 INPP5KQ9BT40 448 aa8.94□□□□□ -0.98
CLIP1-214ENST00000540539 FICDQ9BVA6 458 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms