RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ARHGEF7Q14155 803 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF460Q14592 562 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 IRF4Q15306 451 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 VTCN1Q7Z7D3 282 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TMED4Q7Z7H5 227 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TMPRSS11BQ86T26 416 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 NLRP8Q86W28 1048 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ARMC10Q8N2F6 343 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 DCBLD1Q8N8Z6 715 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 GPR151Q8TDV0 419 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF689Q96CS4 500 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 COQ8BQ96D53 544 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 FNDC11Q9BVV2 318 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HDHD5Q9BXW7 423 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 NKX6-2Q9C056 277 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CRISPLD2Q9H0B8 497 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TCRBV3S1A0A5B6 114 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 M0QZK8 103 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SDHDO14521 159 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 GGCTO75223 188 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SBK3P0C264 359 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RFX3P48380 749 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HSF5Q4G112 596 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CLLU1Q5K131 121 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 DCST1Q5T197 706 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SLC22A25Q6T423 547 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MAVSQ7Z434 540 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CD163Q86VB7 1156 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TPRA1Q86W33 373 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 GID4Q8IVV7 300 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PELI3Q8N2H9 469 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PGBD5Q8N414 524 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 HCAR2Q8TDS4 363 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF296Q8WUU4 475 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ACOT11Q8WXI4 607 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 FCRL1Q96LA6 429 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 LYSMD1Q96S90 227 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CLSTN3Q9BQT9 956 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 BCL2L14Q9BZR8 327 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 C20orf27Q9GZN8 174 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CAPN10Q9HC96 672 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MIEF1Q9NQG6 463 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 RBFOX1Q9NWB1 397 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 FAM120CQ9NX05 1096 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MIA3Q5JRA6 1907 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF98A6NK75 572 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ANKRD66B4E2M5 251 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SEC14L2O76054 403 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ALPIP09923 528 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 NTSP30990 170 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ACVRL1P37023 503 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ACTBP60709 375 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ACTG1P63261 375 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 KCNC4Q03721 635 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ASAH1Q13510 395 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TCEA2Q15560 299 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SLC36A3Q495N2 470 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 AWAT2Q6E213 333 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SFRP4Q6FHJ7 346 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TMEM88Q6PEY1 159 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 Q6ZNB5 142 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TMPRSS9Q7Z410 1059 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 MTURNQ8N3F0 131 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 OR6M1Q8NGM8 313 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CNOT9Q92600 299 aaKnown RBP5.76□□□□□ -1.49
PTPRD-214ENST00000540109 PANX1Q96RD7 426 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 OR10A4Q9H209 315 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 SLC25A32Q9H2D1 315 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 CRLS1Q9UJA2 301 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 TRAPPC4Q9Y296 219 aa5.76□□□□□ -1.49
PTPRD-214ENST00000540109 ANKRD36A6QL64 1941 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 PRSS47A8MTI9 375 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 SC5DO75845 299 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 CCL5P13501 91 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 UGT2B7P16662 529 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 HK1P19367 917 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 HMGCLP35914 325 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 HOXA1P49639 335 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 RAB13P51153 203 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 KIAA1024LP59773 190 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 SNRPD1P62314 119 aaKnown RBP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 POLR2LP62875 67 aaKnown RBP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 ADAM8P78325 824 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 SMAD3P84022 425 aaKnown RBP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 CD47Q08722 323 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 TRAM2Q15035 370 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF697Q5TEC3 545 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 LFNGQ8NES3 379 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 DTD1Q8TEA8 209 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 OLAHQ9NV23 265 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 GMPR2Q9P2T1 348 aaKnown RBP5.75□□□□□ -1.49
PTPRD-214ENST00000540109 RIMS3Q9UJD0 308 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 SLC27A6Q9Y2P4 619 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 VWA8A3KMH1 1905 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 CBX4O00257 560 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 PIP5K1BO14986 540 aa5.75□□□□□ -1.49
PTPRD-214ENST00000540109 TCAPO15273 167 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms