RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HSD17B7P56937 341 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 DAB2P98082 770 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ID2Q02363 134 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ACY1Q03154 408 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 MAPK11Q15759 364 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 NRF1Q16656 503 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 FHL5Q5TD97 284 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 MFSD12Q6NUT3 480 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 CDC73Q6P1J9 531 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ZCCHC12Q6PEW1 402 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 DCDC5Q6ZRR9 648 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 C7orf57Q8NEG2 295 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR5D16Q8NGK9 328 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR10Q1Q8NGQ4 319 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR2I1PQ8NGU4 316 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 GEMIN6Q8WXD5 167 aaKnown RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 SDCCAG3Q96C92 435 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ZNF501Q96CX3 271 aaPredicted RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 PEX11GQ96HA9 241 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 C7orf34Q96L11 122 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 NDC1Q9BTX1 674 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 GTPBP2Q9BX10 602 aaKnown RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 PRTFDC1Q9NRG1 225 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 CALML5Q9NZT1 146 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 RAB23Q9ULC3 237 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 SPTBP11277 2137 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 KHNYNO15037 678 aaKnown RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 NT5EP21589 574 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 VLDLRP98155 873 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 LPAL2Q16609 132 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 PRICKLE4Q2TBC4 344 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ATAD3BQ5T9A4 648 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR2T5Q6IEZ7 315 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 FAM111BQ6SJ93 734 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ZNF574Q6ZN55 896 aaPredicted RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 NANOGNBQ7Z5D8 188 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 KRT73Q86Y46 540 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ZDHHC13Q8IUH4 622 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 MINDY2Q8NBR6 621 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR2T29Q8NH02 315 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR51Q1Q8NH59 317 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR5K1Q8NHB7 308 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 IFI44Q8TCB0 444 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 CTHRC1Q96CG8 243 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 CNBD2Q96M20 576 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR1F2PQ96R84 312 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OR7D2Q96RA2 312 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 TREX2Q9BQ50 279 aaPredicted RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 PELOQ9BRX2 385 aaKnown RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 SPATA5L1Q9BVQ7 753 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 BTBD2Q9BX70 525 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 OSBPL10Q9BXB5 764 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 THSD1Q9NS62 852 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 FGF21Q9NSA1 209 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 MAT2BQ9NZL9 334 aa15.79■□□□□ 0.12
COPS3-212ENST00000539941 ATXN7L1Q9ULK2 861 aaPredicted RBP15.79■□□□□ 0.12
COPS3-212ENST00000539941 SPTBN4Q9H254 2564 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 DMXL1Q9Y485 3027 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 PRAMEF27A3QJZ7 478 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 C7orf72A4D263 438 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 HNRNPCL2B2RXH8 293 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 DSCR3O14972 297 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 ZNF749O43361 778 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 OR10H2O60403 315 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 SOX30O94993 753 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 MFN2O95140 757 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 H6PDO95479 791 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 HPRP00739 348 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 OPN1SWP03999 348 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 GSTT2P0CG29 244 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 GSTT2BP0CG30 244 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 ITGA2P17301 1181 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 FUT4P22083 530 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 ENTPD1P49961 510 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 RPS3AP61247 264 aaKnown RBP15.78■□□□□ 0.12
COPS3-212ENST00000539941 MAT1AQ00266 395 aaKnown RBP15.78■□□□□ 0.12
COPS3-212ENST00000539941 MGAT2Q10469 447 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 STX4Q12846 297 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 MAP4K2Q12851 820 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 SLC13A2Q13183 592 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 TTLL10Q6ZVT0 673 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 TMPRSS9Q7Z410 1059 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 HIPK1Q86Z02 1210 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 SLC44A2Q8IWA5 706 aaPredicted RBP15.78■□□□□ 0.12
COPS3-212ENST00000539941 ADAMTS15Q8TE58 950 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 C16orf58Q96GQ5 468 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 TRNT1Q96Q11 434 aaKnown RBP15.78■□□□□ 0.12
COPS3-212ENST00000539941 ZNF347Q96SE7 839 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 ARRDC1-AS1Q9H2J1 176 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 EXD2Q9NVH0 621 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 ABCG2Q9UNQ0 655 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 SRPK3Q9UPE1 567 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 MYRFQ9Y2G1 1151 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 MMACHCQ9Y4U1 282 aa15.78■□□□□ 0.12
COPS3-212ENST00000539941 G3V2T6 193 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 EI24O14681 340 aa15.77■□□□□ 0.12
COPS3-212ENST00000539941 GALNSP34059 522 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms