RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 HOXD12P35452 270 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 DTX3Q8N9I9 347 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 IL17RDQ8NFM7 739 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 OR4F15Q8NGB8 312 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 DHRS1Q96LJ7 313 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 FAM183AA6NL82 134 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 KAT7O95251 611 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 PSMA1P25786 263 aaKnown RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 AK4P27144 223 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 TIE1P35590 1138 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 CCL4L1Q8NHW4 92 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 NELL2Q99435 816 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 MND1Q9BWT6 205 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 TXNL4BQ9NX01 149 aaKnown RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 ISPDA4D126 451 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ARRDC5A6NEK1 342 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 H0Y8X5 98 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 MPZL2O60487 215 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 GNSP15586 552 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 RFX2P48378 723 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 TAS2R41P59536 307 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 COPZ1P61923 177 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 RHAGQ02094 409 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 SLC9A5Q14940 896 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 CST6Q15828 149 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 TYW3Q6IPR3 259 aaKnown RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 FAM111BQ6SJ93 734 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 VITQ6UXI7 678 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 SLC35B4Q969S0 331 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 RNFT2Q96EX2 444 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 SAP130Q9H0E3 1048 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 MIXL1Q9H2W2 232 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 PRDM7Q9NQW5 492 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ASB4Q9Y574 426 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 WDFY3Q8IZQ1 3526 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 NPIPA5A0A0B4J1W7 369 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 A0A1W2PQ09 198 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 FAM170BA6NMN3 283 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 NPIPA7E9PJI5 369 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 BTN3A3O00478 584 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 PDE9AO76083 593 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 THY1P04216 161 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 NPIPA8P0DM63 369 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 HIST1H1TP22492 207 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 TCEA1P23193 301 aaKnown RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 CXCR2P25025 360 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 PDX1P52945 283 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 TEKQ02763 1124 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF311Q5JNZ3 666 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 KIAA1161Q6NSJ0 714 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ZCCHC10Q8TBK6 192 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 SMAP2Q8WU79 429 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-210ENST00000539599 SMARCD2Q92925 531 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ART5Q96L15 291 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 STUB1Q9UNE7 303 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.29
UBE3B-210ENST00000539599 ASNA1O43681 348 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 LGI1O95970 557 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 PTTG1O95997 202 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 CA3P07451 260 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 PIPP12273 146 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ATP5A1P25705 553 aaKnown RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 PPP2R1BP30154 601 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 RAB28P51157 221 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 GAS1P54826 345 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 IFITM2Q01629 132 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 RPA4Q13156 261 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 LRRC32Q14392 662 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF791Q3KP31 576 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TUBA3EQ6PEY2 450 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TXNDC15Q96J42 360 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 NDUFB11Q9NX14 153 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 A0A1W2PRQ8 180 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 CCNKO75909 580 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 CEACAM5P06731 702 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 NTSP30990 170 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms