RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 IGFBP2P18065 325 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 KRT4P19013 534 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PTPN6P29350 595 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PTGDSP41222 190 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CORO7P57737 925 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 DNAJB13P59910 316 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CRYZQ08257 329 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ZNF763Q0D2J5 394 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 C2orf80Q0P641 193 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PRSS53Q2L4Q9 553 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ERCC6LQ2NKX8 1250 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 WIPI1Q5MNZ9 446 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TIGD3Q6B0B8 471 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SAMD14Q8IZD0 417 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 FAM9CQ8IZT9 166 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 OR1J4Q8NGS1 313 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 NTNG2Q96CW9 530 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 C14orf79Q96F83 325 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 BBS4Q96RK4 519 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TIMP4Q99727 224 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 OSBPL11Q9BXB4 747 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 OXSMQ9NWU1 459 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 KLRF1Q9NZS2 232 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SENP1Q9P0U3 644 aa17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 GPR55Q9Y2T6 319 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-212ENST00000539372 KDM4EB2RXH2 506 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TO15178 435 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ICOSLGO75144 302 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 REM1O75628 298 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 BCAS2O75934 225 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 DDCP20711 480 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 WNT3P56703 355 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CLEC6AQ6EIG7 209 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SLC30A6Q6NXT4 461 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SEM1Q6ZVN7 128 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 WDR53Q7Z5U6 358 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 OR7G2Q8NG99 324 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 RDH11Q8TC12 318 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 BTBD9Q96Q07 612 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 FOLH1BQ9HBA9 442 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SIRT5Q9NXA8 310 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 MAPRE3Q9UPY8 281 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PCDHGB3Q9Y5G1 929 aa17.41■□□□□ 0.38
TNFRSF1A-212ENST00000539372 HCFC1P51610 2035 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TLDC2A0PJX2 215 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PRAMEF25A6NGN4 478 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SNPHO15079 494 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CDH16O75309 829 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ERN1O75460 977 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 FREM3P0C091 2139 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CT45A8P0DMV1 189 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CT45A9P0DMV2 189 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 BMP7P18075 431 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ELAVL4P26378 380 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 MPIP34949 423 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 GSTM5P46439 218 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 NAA20P61599 178 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CEBPEQ15744 281 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ACSF3Q4G176 576 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CT45A2Q5DJT8 189 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 DCST1Q5T197 706 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 RIPPLY2Q5TAB7 128 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 LIPMQ5VYY2 423 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TMEM81Q6P7N7 255 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 NPSR1Q6W5P4 371 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 TRIM46Q7Z4K8 759 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 YRDCQ86U90 279 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 C10orf107Q8IVU9 208 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 DMRTC2Q8IXT2 367 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 FAM83FQ8NEG4 500 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 OR2W6PQ8NHA6 318 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ERP27Q96DN0 273 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 VSTM2LQ96N03 204 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 COL21A1Q96P44 957 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 ADOQ96SZ5 270 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 SERHLQ9NQF3 203 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 MIEF1Q9NQG6 463 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 CAMK2AQ9UQM7 478 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PTGDR2Q9Y5Y4 395 aa17.4■□□□□ 0.38
TNFRSF1A-212ENST00000539372 PDZD2O15018 2839 aa17.39■□□□□ 0.38
TNFRSF1A-212ENST00000539372 AHRRA9YTQ3 701 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 FAM47E-STBD1D6RA91 191 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 H3BQF6 201 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 RSL1D1O76021 490 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 JUNP05412 331 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 UROSP10746 265 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 NCBP2P52298 156 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 SLC18A2Q05940 514 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 SNTA1Q13424 505 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 VASNQ6EMK4 673 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 FAM71E1Q6IPT2 247 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TNIP2Q8NFZ5 429 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TMCO6Q96DC7 493 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 UGT2B28Q9BY64 529 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 ANKZF1Q9H8Y5 726 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 MCCC2Q9HCC0 563 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 MYNNQ9NPC7 610 aa17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 RRAGDQ9NQL2 400 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-212ENST00000539372 FIS1Q9Y3D6 152 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms