RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SNTA1Q13424 505 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 OR5M10Q6IEU7 315 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 TMEM81Q6P7N7 255 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 CTAGE3PQ8IX95 158 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 KCNF1Q9H3M0 494 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 NMRAL1Q9HBL8 299 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 DKKL1Q9UK85 242 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 DLGAP4Q9Y2H0 992 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 RNF11Q9Y3C5 154 aa12.68□□□□□ -0.38
SMARCA4-206ENST00000538456 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 SLC22A20A6NK97 555 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 EFCAB8A8MWE9 144 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 KLK1P06870 262 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 LTA4HP09960 611 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 MTHFD2P13995 350 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 GFAPP14136 432 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 POU2F1P14859 743 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 PFKFB4Q16877 469 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 ZNF474Q6S9Z5 364 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 CHMP1BQ7LBR1 199 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 PLCZ1Q86YW0 608 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 ADCY4Q8NFM4 1077 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 WDR20Q8TBZ3 569 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 PGM2Q96G03 612 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 MAT2BQ9NZL9 334 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 HEY2Q9UBP5 337 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 PLLPQ9Y342 182 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
SMARCA4-206ENST00000538456 GOLGA6L10A6NI86 522 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 SYCE1LA8MT33 242 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 ACOX3O15254 700 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 HCRTR2O43614 444 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 ERAL1O75616 437 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 SRD5A2P31213 254 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 HMGCS1Q01581 520 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 GTF2H2Q13888 395 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 LTB4RQ15722 352 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 PRICKLE4Q2TBC4 344 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 ANKRD34AQ69YU3 496 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 GTF2H2CQ6P1K8 395 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 OR52R1Q8NGF1 315 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 KCTD4Q8WVF5 259 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 TMBIM1Q969X1 311 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 NXNL1Q96CM4 212 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 MARK4Q96L34 752 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 CDK15Q96Q40 435 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 MRPL1Q9BYD6 325 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 IPPKQ9H8X2 491 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 CFL2Q9Y281 166 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 CUBNO60494 3623 aa12.66□□□□□ -0.38
SMARCA4-206ENST00000538456 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 C17orf51A8MQB3 221 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 FOXE1O00358 373 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 UGDHO60701 494 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 CRLF1O75462 422 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 REM1O75628 298 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 SEMA3DO95025 777 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 SIX3O95343 332 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 CBX7O95931 251 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 CRHP06850 196 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 NR1H2P55055 460 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 GPX6P59796 221 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 MRPS35P82673 323 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 IRF9Q00978 393 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 MGAT2Q10469 447 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 CCNYL2Q5T2Q4 361 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 C22orf34Q6ZV56 151 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 PLEKHM3Q6ZWE6 761 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 PPM1NQ8N819 430 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 FIG4Q92562 907 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 TMCO6Q96DC7 493 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 COL21A1Q96P44 957 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 SLC39A3Q9BRY0 314 aa12.65□□□□□ -0.38
SMARCA4-206ENST00000538456 ANK3Q12955 4377 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ESPNB1AK53 854 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 H0YC42 278 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ZIC3O60481 467 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 NME6O75414 186 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ATP1B1P05026 303 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 PCSK2P16519 638 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 GRK2P25098 689 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms