RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 STBD1O95210 358 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PCP4P48539 62 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 NUBP1P53384 320 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 RAG2P55895 527 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 RAP2BP61225 183 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 HTRA4P83105 476 aaPredicted RBP10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 VLDLRP98155 873 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 KRT33BQ14525 404 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 EXOC3L2Q2M3D2 409 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 SOWAHAQ2M3V2 549 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF613Q6PF04 617 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM122BQ7Z309 247 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 SPPL2AQ8TCT8 520 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 OR6C2Q9NZP2 312 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC31A2O15432 143 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SUV39H1O43463 412 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 RGS14O43566 566 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 GDI1P31150 447 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CTBP2P56545 445 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CPNE4Q96A23 557 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 OR4K3Q96R72 315 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 ZCCHC2Q9C0B9 1178 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 MGAT4CQ9UBM8 478 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 INSL5Q9Y5Q6 135 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 NCF1BA6NI72 391 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 NCF1CA8MVU1 366 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CRYBA1P05813 215 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 HOXA11P31270 313 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 PXNP49023 591 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SPIBQ01892 262 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 PTGR1Q14914 329 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 UAP1L1Q3KQV9 507 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 LGI4Q8N135 537 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM46DQ8NEK8 389 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 OR56B4Q8NH76 319 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 IFT27Q9BW83 186 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM126AQ9BYI3 521 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 ALX4Q9H161 411 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 IKZF5Q9H5V7 419 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC6A20Q9NP91 592 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CRYL1Q9Y2S2 319 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 MCM3APO60318 1980 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 NIPSNAP2O75323 286 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 TAS2R60P59551 318 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 RAB33AQ14088 237 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 HLXQ14774 488 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SPANXN4Q5MJ08 99 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM74A1Q5RGS3 127 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CASP12Q6UXS9 341 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC5A8Q8N695 610 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 GPR26Q8NDV2 337 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 OR14A16Q8NHC5 309 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 NDRG1Q92597 394 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 PCED1BQ96HM7 432 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CPPED1Q9BRF8 314 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 C7orf50Q9BRJ6 194 aaKnown RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 GPR62Q9BZJ7 368 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 SIX4Q9UIU6 781 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 PCDHGA2Q9Y5H1 932 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 LOC285556D6RIA3 1793 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 KLK3P07288 261 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 EPCAMP16422 314 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CALCRP30988 508 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 TMUB2Q71RG4 321 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 VTCN1Q7Z7D3 282 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 PIM3Q86V86 326 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 OR10K1Q8NGX5 313 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 RNFT2Q96EX2 444 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 CIPCQ9C0C6 399 aa10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 FAM124BQ9H5Z6 455 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 GPN1Q9HCN4 374 aaPredicted RBP10.3□□□□□ -0.76
CLSTN3-207ENST00000537408 C5orf58C9J3I9 102 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 PAGE1O75459 146 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ATP5A1P25705 553 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 PSMA3P25788 255 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 KDELR2P33947 212 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CDKN2DP55273 166 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 OR4D1Q15615 310 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 TCEAL6Q6IPX3 200 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 UQCC3Q6UW78 93 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 DNAJB7Q7Z6W7 309 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 CALHM3Q86XJ0 350 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 SYNPOQ8N3V7 929 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 OR5J2Q8NH18 312 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 REEP4Q9H6H4 257 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 IMP3Q9NV31 184 aaKnown RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 RBM22Q9NW64 420 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 NKIRAS2Q9NYR9 191 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 GHRLQ9UBU3 117 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 OR12D3Q9UGF7 316 aa10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 ATXN7L1Q9ULK2 861 aaPredicted RBP10.29□□□□□ -0.76
CLSTN3-207ENST00000537408 AP1M2Q9Y6Q5 423 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms